RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CISHQ9NSE2 258 aa11.95□□□□□ -0.5
HDAC4-210ENST00000493582 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.94□□□□□ -0.5
HDAC4-210ENST00000493582 C9IYK1 514 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 H0YJX3 145 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 ZNF701M0R085 212 aaPredicted RBP11.94□□□□□ -0.5
HDAC4-210ENST00000493582 TIPRLO75663 272 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 LTFP02788 710 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 HMGCRP04035 888 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 JUNP05412 331 aaKnown RBP11.94□□□□□ -0.5
HDAC4-210ENST00000493582 PABPC1P11940 636 aaKnown RBP11.94□□□□□ -0.5
HDAC4-210ENST00000493582 KCNC4Q03721 635 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 RALGDSQ12967 914 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 TRIM16LQ309B1 348 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 GALNT18Q6P9A2 607 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 MAMDC4Q6UXC1 1216 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 CHSY3Q70JA7 882 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 C4orf19Q8IY42 314 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 HACE1Q8IYU2 909 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 PLD5Q8N7P1 536 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 ACMSDQ8TDX5 336 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 SLC7A3Q8WY07 619 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 TFAP2CQ92754 450 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 CEP170P1Q96L14 293 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 PGLYRP2Q96PD5 576 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 AGO4Q9HCK5 861 aaKnown RBP11.94□□□□□ -0.5
HDAC4-210ENST00000493582 GIN1Q9NXP7 522 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 ERGIC3Q9Y282 383 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 HES2Q9Y543 173 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 GREB1LQ9C091 1923 aaPredicted RBP11.94□□□□□ -0.5
HDAC4-210ENST00000493582 SAC3D1A6NKF1 404 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 GOLGA8TH3BQL2 631 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 NRP1O14786 923 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 MX2P20592 715 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 NEDD8Q15843 81 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 CDO1Q16878 200 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 EML3Q32P44 896 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 BSPRYQ5W0U4 402 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 CES3Q6UWW8 571 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 LRRC39Q96DD0 335 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 CNDP1Q96KN2 507 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 AGAP3Q96P47 875 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 CPXM1Q96SM3 734 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 APBA2Q99767 749 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 TPK1Q9H3S4 243 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 PRDM16Q9HAZ2 1276 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 CYP26B1Q9NR63 512 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 GPATCH2LQ9NWQ4 482 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 FZD1Q9UP38 647 aa11.94□□□□□ -0.5
HDAC4-210ENST00000493582 AQP9O43315 295 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 LYPLA2O95372 231 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 CD19P15391 556 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 CNTFP26441 200 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 MAGEA3P43357 314 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 ORC1Q13415 861 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 MTMR1Q13613 665 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 TRIM25Q14258 630 aaKnown RBP11.93□□□□□ -0.5
HDAC4-210ENST00000493582 STILQ15468 1287 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 TKFCQ3LXA3 575 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 LDLRAP1Q5SW96 308 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 RSBN1LQ6PCB5 846 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-210ENST00000493582 EEPD1Q7L9B9 569 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 SIX6OS1Q8N1H7 587 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 SAMD3Q8N6K7 520 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 ACER1Q8TDN7 264 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 ACDQ96AP0 544 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 SMOXQ9NWM0 555 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 TCEAL9Q9UHQ7 104 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 GNPTGQ9UJJ9 305 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 CROTQ9UKG9 612 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 TCAF2A6NFQ2 919 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 E7ENX8 843 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 TRIM38O00635 465 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 AKAP10O43572 662 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 KCNH1O95259 989 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 CCNE2O96020 404 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 LDHAP00338 332 aaKnown RBP11.93□□□□□ -0.5
HDAC4-210ENST00000493582 ABCG1P45844 678 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 RHDQ02161 417 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 PRKCQQ04759 706 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 TRPC3Q13507 836 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 BTLAQ7Z6A9 289 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 LPGAT1Q92604 370 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 ASB9Q96DX5 294 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 GBA3Q9H227 469 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 FBXO28Q9NVF7 368 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 GPRC5DQ9NZD1 345 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 MRPL11Q9Y3B7 192 aaKnown RBP11.93□□□□□ -0.5
HDAC4-210ENST00000493582 A8MU76 341 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-210ENST00000493582 KDM1AO60341 852 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 ESRRBO95718 433 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 DCKP27707 260 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 YAP1P46937 504 aaKnown RBP11.93□□□□□ -0.5
HDAC4-210ENST00000493582 MLLT10P55197 1068 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 BCAR1P56945 870 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 MYL6P60660 151 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 RPS3AP61247 264 aaKnown RBP11.93□□□□□ -0.5
HDAC4-210ENST00000493582 MRPS9P82933 396 aaKnown RBP11.93□□□□□ -0.5
HDAC4-210ENST00000493582 DLG2Q15700 870 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms