RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 SIX6OS1Q8N1H7 587 aa14.74□□□□□ -0.05
PRPF40A-211ENST00000493468 STK40Q8N2I9 435 aa14.74□□□□□ -0.05
PRPF40A-211ENST00000493468 KCTD13Q8WZ19 329 aa14.74□□□□□ -0.05
PRPF40A-211ENST00000493468 PTPRN2Q92932 1015 aa14.74□□□□□ -0.05
PRPF40A-211ENST00000493468 GRAMD1AQ96CP6 724 aa14.74□□□□□ -0.05
PRPF40A-211ENST00000493468 CCDC97Q96F63 343 aaPredicted RBP14.74□□□□□ -0.05
PRPF40A-211ENST00000493468 TMEM8AQ9HCN3 771 aa14.74□□□□□ -0.05
PRPF40A-211ENST00000493468 MTMR6Q9Y217 621 aa14.74□□□□□ -0.05
PRPF40A-211ENST00000493468 TRAF3IP3Q9Y228 551 aa14.74□□□□□ -0.05
PRPF40A-211ENST00000493468 COL12A1Q99715 3063 aa14.74□□□□□ -0.05
PRPF40A-211ENST00000493468 GOLGA6L7A0A1B0GV03 622 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 IL1BP01584 269 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 TRIM49P0CI25 452 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 TRIM49CP0CI26 452 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 GIMD1P0DJR0 217 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 GTF2H1P32780 548 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 CTSOP43234 321 aaPredicted RBP14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 DAOAP59103 153 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 GOLGA7BQ2TAP0 167 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 RNF219Q5W0B1 726 aaPredicted RBP14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 NADSYN1Q6IA69 706 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 CCDC117Q8IWD4 279 aaPredicted RBP14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 TMEM145Q8NBT3 493 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 TATDN2Q93075 761 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 KLHDC7BQ96G42 594 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 SPAG5Q96R06 1193 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 EXOC1Q9NV70 894 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 EVA1BQ9NVM1 165 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 KLHL11Q9NVR0 708 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 NLGN3Q9NZ94 848 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 STIM2Q9P246 746 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 HESX1Q9UBX0 185 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 SLCO3A1Q9UIG8 710 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 TSPAN16Q9UKR8 245 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 BSNQ9UPA5 3926 aa14.73□□□□□ -0.05
PRPF40A-211ENST00000493468 RIOK3O14730 519 aaKnown RBP14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 CALUO43852 315 aaPredicted RBP14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 LUC7L3O95232 432 aaKnown RBP14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 SETSIPP0DME0 302 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 ALPPL2P10696 532 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 AFMP43652 599 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 DUSP3P51452 185 aaPredicted RBP14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 RPS24P62847 133 aaKnown RBP14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 FSCBQ5H9T9 825 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 KRT39Q6A163 491 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 DSG4Q86SJ6 1040 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 LURAP1LQ8IV03 231 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 CARNMT1Q8N4J0 409 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 IRGQQ8WZA9 623 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 IFT43Q96FT9 208 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 UCKL1Q9NWZ5 548 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 IL17BQ9UHF5 180 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 PCDHGA8Q9Y5G5 932 aa14.72□□□□□ -0.05
PRPF40A-211ENST00000493468 LY6G6EA0A0G2JKS1 128 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 RTN2O75298 545 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 PIAS2O75928 621 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 KRT13P13646 458 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 PDIA4P13667 645 aaKnown RBP14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 MAT2AP31153 395 aaKnown RBP14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 NNMTP40261 264 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 MLLT3P42568 568 aaPredicted RBP14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 VASPP50552 380 aaPredicted RBP14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 TBX4P57082 545 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 KCNMA1Q12791 1236 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 NNTQ13423 1086 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 ISXQ2M1V0 245 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 SGO2Q562F6 1265 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 MS4A13Q5J8X5 152 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 AGBL4Q5VU57 503 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 FAM46CQ5VWP2 391 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 KIAA1614Q5VZ46 1190 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 XKR5Q6UX68 686 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 MMS22LQ6ZRQ5 1243 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 PRICKLE2Q7Z3G6 844 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 MYEOVQ96EZ4 313 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 APOLD1Q96LR9 279 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 SLC46A1Q96NT5 459 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 PREBQ9HCU5 417 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 CEP83Q9Y592 693 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 U3KQA8 63 aa14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 TLN1Q9Y490 2541 aaKnown RBP14.71□□□□□ -0.05
PRPF40A-211ENST00000493468 KIF26BQ2KJY2 2108 aa14.71□□□□□ -0.06
PRPF40A-211ENST00000493468 DOPEY2Q9Y3R5 2298 aa14.71□□□□□ -0.06
PRPF40A-211ENST00000493468 AHCTF1Q8WYP5 2266 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 CDRT15L2A8MXV6 281 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 TERTO14746 1132 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 FFAR2O15552 330 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 THEGLP0DJG4 465 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 NR2F2P24468 414 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 RBMS1P29558 406 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 SULT2A1Q06520 285 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 SLC12A1Q13621 1099 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 CCDC81Q6ZN84 652 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 TMC6Q7Z403 805 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 FAM186BQ8IYM0 893 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 FBXL13Q8NEE6 735 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 FRS2Q8WU20 508 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 SEMA4DQ92854 862 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 FCRL2Q96LA5 508 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms