RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 GRIA2P42262 883 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 NR2C2P49116 596 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 IRAK1P51617 712 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 PLK1P53350 603 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 POLD3Q15054 466 aaPredicted RBP11.86□□□□□ -0.51
LSM2-214ENST00000493387 PAFAH1B3Q15102 231 aaKnown RBP11.86□□□□□ -0.51
LSM2-214ENST00000493387 MLF2Q15773 248 aaPredicted RBP11.86□□□□□ -0.51
LSM2-214ENST00000493387 GAB4Q2WGN9 574 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 PAPD7Q5XG87 772 aaKnown RBP11.86□□□□□ -0.51
LSM2-214ENST00000493387 SLC9A4Q6AI14 798 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 BBS12Q6ZW61 710 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 ANKS1BQ7Z6G8 1248 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 CIR1Q86X95 450 aaPredicted RBP11.86□□□□□ -0.51
LSM2-214ENST00000493387 PQLC3Q8N755 202 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 NAT16Q8N8M0 369 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 TTC13Q8NBP0 860 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 CCDC26Q8TAB7 109 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 TTC8Q8TAM2 541 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 C16orf45Q96MC5 204 aaPredicted RBP11.86□□□□□ -0.51
LSM2-214ENST00000493387 UHRF1Q96T88 793 aaPredicted RBP11.86□□□□□ -0.51
LSM2-214ENST00000493387 NAP1L3Q99457 506 aaPredicted RBP11.86□□□□□ -0.51
LSM2-214ENST00000493387 P2RY13Q9BPV8 354 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 MRPS17Q9Y2R5 130 aaKnown RBP11.86□□□□□ -0.51
LSM2-214ENST00000493387 SAR1BQ9Y6B6 198 aa11.86□□□□□ -0.51
LSM2-214ENST00000493387 TCF20Q9UGU0 1960 aaKnown RBP11.86□□□□□ -0.51
LSM2-214ENST00000493387 A0A0A0MRY4 1105 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 CXorf51AA0A1B0GTR3 108 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 CEP104O60308 925 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 CST8O60676 142 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 ZNF189O75820 626 aaPredicted RBP11.85□□□□□ -0.51
LSM2-214ENST00000493387 GNA12Q03113 381 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 SULT2A1Q06520 285 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 GRSF1Q12849 480 aaKnown RBP eCLIP11.85□□□□□ -0.51
LSM2-214ENST00000493387 LMAN2Q12907 356 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 ZNF211Q13398 564 aaPredicted RBP11.85□□□□□ -0.51
LSM2-214ENST00000493387 EIF4HQ15056 248 aaKnown RBP11.85□□□□□ -0.51
LSM2-214ENST00000493387 CCDC181Q5TID7 509 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 DCAF12L1Q5VU92 463 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 RNF219Q5W0B1 726 aaPredicted RBP11.85□□□□□ -0.51
LSM2-214ENST00000493387 AFMIDQ63HM1 303 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 KAZNQ674X7 775 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 CXorf57Q6NSI4 855 aaKnown RBP11.85□□□□□ -0.51
LSM2-214ENST00000493387 SYT10Q6XYQ8 523 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 ZNF852Q6ZMS4 543 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 KIAA0907Q7Z7F0 614 aaPredicted RBP11.85□□□□□ -0.51
LSM2-214ENST00000493387 AHI1Q8N157 1196 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 PLD5Q8N7P1 536 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 UCMAQ8WVF2 138 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 LMLNQ96KR4 655 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 OSBPL9Q96SU4 736 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 NELL2Q99435 816 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 FEM1AQ9BSK4 669 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 FRMD8P1Q9BZ68 369 aaPredicted RBP11.85□□□□□ -0.51
LSM2-214ENST00000493387 BRD8Q9H0E9 1235 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 MUC3BQ9H195 1237 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 ARHGEF3Q9NR81 526 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 HEBP1Q9NRV9 189 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 ABCB8Q9NUT2 735 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 RNF14Q9UBS8 474 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 GGA2Q9UJY4 613 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 TTC7AQ9ULT0 858 aaPredicted RBP11.85□□□□□ -0.51
LSM2-214ENST00000493387 HPCAL4Q9UM19 191 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 MYOFQ9NZM1 2061 aa11.85□□□□□ -0.51
LSM2-214ENST00000493387 TBC1D3BA6NDS4 549 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 ZSCAN5CA6NGD5 496 aaPredicted RBP11.84□□□□□ -0.51
LSM2-214ENST00000493387 ESPNB1AK53 854 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 RASA4BC9J798 803 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 APOC4-APOC2K7ER74 178 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 RASA4O43374 803 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 KAT7O95251 611 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 APOC2P02655 101 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 ASLP04424 464 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 ATP5BP06576 529 aaKnown RBP11.84□□□□□ -0.51
LSM2-214ENST00000493387 KRT10P13645 584 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 POLR2EP19388 210 aaKnown RBP11.84□□□□□ -0.51
LSM2-214ENST00000493387 DRD1P21728 446 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 HLA-FP30511 346 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 CSKP41240 450 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 TNFRSF4P43489 277 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 SLC6A11P48066 632 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 SOX9P48436 509 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 GALK1P51570 392 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 GEMIN4P57678 1058 aaKnown RBP11.84□□□□□ -0.51
LSM2-214ENST00000493387 ZXDAP98168 799 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 SLC20A2Q08357 652 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 TUBB2AQ13885 445 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 PDK1Q15118 436 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 PLEKHG6Q3KR16 790 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 FBXO43Q4G163 708 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 FSCBQ5H9T9 825 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 NCBP2-AS2Q69YL0 99 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 TPRG1Q6ZUI0 275 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 C12orf40Q86WS4 652 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 SLC13A5Q86YT5 568 aaPredicted RBP11.84□□□□□ -0.51
LSM2-214ENST00000493387 TERB1Q8NA31 727 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 DCAF4L2Q8NA75 395 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 KIF18AQ8NI77 898 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 KCNV2Q8TDN2 545 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 FAM3CQ92520 227 aa11.84□□□□□ -0.51
LSM2-214ENST00000493387 P3H4Q92791 437 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms