RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 DNAJC3Q13217 504 aa23.26■■□□□ 1.31
HMG20B-214ENST00000493191 TTI2Q6NXR4 508 aa23.26■■□□□ 1.31
HMG20B-214ENST00000493191 SAP25Q8TEE9 199 aa23.26■■□□□ 1.31
HMG20B-214ENST00000493191 CNDP2Q96KP4 475 aaKnown RBP23.26■■□□□ 1.31
HMG20B-214ENST00000493191 BTN2A3PQ96KV6 586 aa23.26■■□□□ 1.31
HMG20B-214ENST00000493191 TIGD1Q96MW7 591 aa23.26■■□□□ 1.31
HMG20B-214ENST00000493191 GDF3Q9NR23 364 aa23.26■■□□□ 1.31
HMG20B-214ENST00000493191 CYTH4Q9UIA0 394 aa23.26■■□□□ 1.31
HMG20B-214ENST00000493191 COL5A1P20908 1838 aaPredicted RBP23.25■■□□□ 1.31
HMG20B-214ENST00000493191 C10orf142B7Z368 130 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 PLK4O00444 970 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 TRUB2O95900 331 aaKnown RBP23.25■■□□□ 1.31
HMG20B-214ENST00000493191 PDGFRAP16234 1089 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 MZF1P28698 734 aaPredicted RBP23.25■■□□□ 1.31
HMG20B-214ENST00000493191 PITX1P78337 314 aaPredicted RBP23.25■■□□□ 1.31
HMG20B-214ENST00000493191 KCNH2Q12809 1159 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.25■■□□□ 1.31
HMG20B-214ENST00000493191 BEND5Q7L4P6 421 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 TMPRSS12Q86WS5 348 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 CIR1Q86X95 450 aaPredicted RBP23.25■■□□□ 1.31
HMG20B-214ENST00000493191 EID2Q8N6I1 236 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 NELFBQ8WX92 580 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 TRIM62Q9BVG3 475 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 SLC4A5Q9BY07 1137 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 POPDC2Q9HBU9 364 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 CNTN6Q9UQ52 1028 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 BPTFQ12830 3046 aa23.25■■□□□ 1.31
HMG20B-214ENST00000493191 ARID1BQ8NFD5 2236 aaPredicted RBP23.25■■□□□ 1.31
HMG20B-214ENST00000493191 TBC1D3DA0A087WVF3 549 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 TBC1D3IA0A087WXS9 549 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 TBC1D3EA0A087X179 549 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 TBC1D3KA0A087X1G2 549 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 TBC1D3FA6NER0 549 aaPredicted RBP23.24■■□□□ 1.31
HMG20B-214ENST00000493191 TBC1D3LB9A6J9 549 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 E5RJQ4 531 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 F5H5T6 163 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 LETM1O95202 739 aaPredicted RBP23.24■■□□□ 1.31
HMG20B-214ENST00000493191 TBC1D3HP0C7X1 549 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 NNMTP40261 264 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 METAP1P53582 386 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 PPP2CBP62714 309 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 YWHAZP63104 245 aaKnown RBP23.24■■□□□ 1.31
HMG20B-214ENST00000493191 PPP2CAP67775 309 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 TBC1D3GQ6DHY5 549 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 TBC1D3CQ6IPX1 549 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 TBC1D3Q8IZP1 549 aaPredicted RBP23.24■■□□□ 1.31
HMG20B-214ENST00000493191 STK32AQ8WU08 396 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 INTS2Q9H0H0 1204 aaKnown RBP23.24■■□□□ 1.31
HMG20B-214ENST00000493191 UBE2TQ9NPD8 197 aaPredicted RBP23.24■■□□□ 1.31
HMG20B-214ENST00000493191 ACP6Q9NPH0 428 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 CTNND2Q9UQB3 1225 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 PCDHGA1Q9Y5H4 931 aa23.24■■□□□ 1.31
HMG20B-214ENST00000493191 KCNU1A8MYU2 1149 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 PPP1R3GB7ZBB8 358 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 TLR4O00206 839 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 IGLV3-25P01717 112 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 JUPP14923 745 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 ARRB1P49407 418 aaPredicted RBP23.23■■□□□ 1.31
HMG20B-214ENST00000493191 BNIP3Q12983 259 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 ELAVL3Q14576 367 aaKnown RBP23.23■■□□□ 1.31
HMG20B-214ENST00000493191 TAF5Q15542 800 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 TMEM110Q86TL2 294 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 TRIM59Q8IWR1 403 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 CCAR2Q8N163 923 aaKnown RBP23.23■■□□□ 1.31
HMG20B-214ENST00000493191 ATP6V0D2Q8N8Y2 350 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 ZNF606Q8WXB4 792 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 CRELD1Q96HD1 420 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 DCBLD2Q96PD2 775 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 BBC3Q96PG8 261 aaPredicted RBP23.23■■□□□ 1.31
HMG20B-214ENST00000493191 MED15Q96RN5 788 aa23.23■■□□□ 1.31
HMG20B-214ENST00000493191 SYNJ2BP-COX16A0A087WUM0 186 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 A0A087WV48 116 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 THAP12O43422 761 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 MED7O43513 233 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 RTN2O75298 545 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 RFPL3O75679 317 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 AFPP02771 609 aaKnown RBP23.22■■□□□ 1.31
HMG20B-214ENST00000493191 BMP6P22004 513 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 EPHA8P29322 1005 aaPredicted RBP23.22■■□□□ 1.31
HMG20B-214ENST00000493191 DRD3P35462 400 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 PPP1R2P41236 205 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 STX17P56962 302 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 NXPH1P58417 271 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 SLC45A4Q5BKX6 768 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 PRMT1Q99873 361 aaKnown RBP23.22■■□□□ 1.31
HMG20B-214ENST00000493191 THAP9Q9H5L6 903 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.22■■□□□ 1.31
HMG20B-214ENST00000493191 COX16Q9P0S2 106 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 SLC12A6Q9UHW9 1150 aa23.22■■□□□ 1.31
HMG20B-214ENST00000493191 MYLKQ15746 1914 aa23.21■■□□□ 1.31
HMG20B-214ENST00000493191 BICDL2A1A5D9 508 aa23.21■■□□□ 1.31
HMG20B-214ENST00000493191 YKT6O15498 198 aa23.21■■□□□ 1.31
HMG20B-214ENST00000493191 LATO43561 262 aa23.21■■□□□ 1.31
HMG20B-214ENST00000493191 MAT2AP31153 395 aaKnown RBP23.21■■□□□ 1.31
HMG20B-214ENST00000493191 SULT2A1Q06520 285 aa23.21■■□□□ 1.31
HMG20B-214ENST00000493191 EIF4EBP2Q13542 120 aaPredicted RBP23.21■■□□□ 1.31
HMG20B-214ENST00000493191 SLC12A1Q13621 1099 aa23.21■■□□□ 1.31
HMG20B-214ENST00000493191 FRS2Q8WU20 508 aa23.21■■□□□ 1.31
HMG20B-214ENST00000493191 SPAG5Q96R06 1193 aa23.21■■□□□ 1.31
HMG20B-214ENST00000493191 FAM204AQ9H8W3 233 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms