RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 COL5A1P20908 1838 aaPredicted RBP8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 A0A1B0GVM2 712 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 A0A1B0GVT2 93 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 A0A1W2PPC4 97 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 TYW5A2RUC4 315 aaKnown RBP8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 TCAF2A6NFQ2 919 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 DRGXA6NNA5 263 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 F5H5T6 163 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 I6L893 689 aaPredicted RBP8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 VILLO15195 856 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 LATO43561 262 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 HYAL3O43820 417 aaPredicted RBP8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 ATP9BO43861 1147 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 DFNA5O60443 496 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 DAB1O75553 588 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 MOCS3O95396 460 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 GOT1P17174 413 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 C5AR1P21730 350 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 MZF1P28698 734 aaPredicted RBP8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 NOS2P35228 1153 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 MATKP42679 507 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 CXCR3P49682 368 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 SNX16P57768 344 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 BPIFB4P59827 614 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 ST8SIA6P61647 398 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 RACK1P63244 317 aaKnown RBP8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 SFSWAPQ12872 951 aaKnown RBP8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 AUHQ13825 339 aaKnown RBP8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 ARHGAP44Q17R89 818 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 DPCR1Q3MIW9 517 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 VWA3BQ502W6 1294 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 KLHDC7AQ5VTJ3 777 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 FAM183BPQ6ZVS7 135 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 SLCO6A1Q86UG4 719 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 CCAR2Q8N163 923 aaKnown RBP8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 AADATQ8N5Z0 425 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 ATP6V0D2Q8N8Y2 350 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 OR52K2Q8NGK3 314 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 IGSF8Q969P0 613 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 COL26A1Q96A83 441 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 C1orf74Q96LT6 269 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 NOX5Q96PH1 765 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 TUBGCP2Q9BSJ2 902 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 MIR1-1HGQ9H1L0 117 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 NEUROG2Q9H2A3 272 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 ANLNQ9NQW6 1124 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 TM7SF3Q9NS93 570 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 FBXL12Q9NXK8 326 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 ARHGEF38Q9NXL2 777 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 RRN3Q9NYV6 651 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 SLC12A6Q9UHW9 1150 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 KLK13Q9UKR3 277 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 ANKRD6Q9Y2G4 727 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 SNX11Q9Y5W9 270 aa8.64□□□□□ -1.03
SMARCB1-207ENST00000491967 ASPMQ8IZT6 3477 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 IGLV3-10A0A075B6K4 115 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 A0A1W2PR77 199 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 MID1O15344 667 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 FLRT2O43155 660 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 SLC7A4O43246 635 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 PAGE1O75459 146 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 CLDN11O75508 207 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 ENDOD1O94919 500 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 MOCS2O96007 188 aaPredicted RBP8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 FTH1P19P0C7X4 201 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 CYP11B1P15538 503 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 ABCB4P21439 1286 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 SLC8A1P32418 973 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 RDXP35241 583 aaKnown RBP8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 DRD3P35462 400 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 KRT9P35527 623 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 IRAK1P51617 712 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 ELAVL3Q14576 367 aaKnown RBP8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 DRAP1Q14919 205 aaPredicted RBP8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 TEAD4Q15561 434 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 BRMS1LQ5PSV4 323 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 ACBD5Q5T8D3 534 aaPredicted RBP8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 NCEH1Q6PIU2 408 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 CCNI2Q6ZMN8 369 aaPredicted RBP8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 CHSY1Q86X52 802 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 CACUL1Q86Y37 369 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 MMAAQ8IVH4 418 aaKnown RBP8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 CCDC117Q8IWD4 279 aaPredicted RBP8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 FAM114A1Q8IWE2 563 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 DHX40Q8IX18 779 aaKnown RBP8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 CHCHD4Q8N4Q1 142 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 OR2T34Q8NGX1 318 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 PPP1R9BQ96SB3 815 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 KDM4CQ9H3R0 1056 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 PLCB1Q9NQ66 1216 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 DDIT4Q9NX09 232 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 ZNF212Q9UDV6 495 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 ZMIZ1Q9ULJ6 1067 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 PPM1HQ9ULR3 514 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 HS3ST2Q9Y278 367 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 NCKAP1Q9Y2A7 1128 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 HS3ST4Q9Y661 456 aa8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 DSPP15924 2871 aaKnown RBP8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 URB1O60287 2271 aaKnown RBP8.63□□□□□ -1.03
SMARCB1-207ENST00000491967 CXorf51AA0A1B0GTR3 108 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms