RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 COQ4Q9Y3A0 265 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 TBC1D3DA0A087WVF3 549 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 TBC1D3IA0A087WXS9 549 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 TBC1D3EA0A087X179 549 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 TBC1D3KA0A087X1G2 549 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 TBC1D3FA6NER0 549 aaPredicted RBP13.68□□□□□ -0.22
USF1-206ENST00000491629 TBC1D3LB9A6J9 549 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 RNF225M0QZC1 329 aaPredicted RBP13.68□□□□□ -0.22
USF1-206ENST00000491629 SIGLEC6O43699 453 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 RTN2O75298 545 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 MT-CO3P00414 261 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 LTFP02788 710 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 SRPRAP08240 638 aaKnown RBP13.68□□□□□ -0.22
USF1-206ENST00000491629 TBC1D3HP0C7X1 549 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 GIMD1P0DJR0 217 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 SETSIPP0DME0 302 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 VDRP11473 427 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 CD19P15391 556 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 MAT2AP31153 395 aaKnown RBP13.68□□□□□ -0.22
USF1-206ENST00000491629 SLC11A2P49281 568 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 KCNH2Q12809 1159 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 DCAF6Q58WW2 860 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 TBC1D3GQ6DHY5 549 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 TBC1D3CQ6IPX1 549 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 LCLAT1Q6UWP7 414 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.68□□□□□ -0.22
USF1-206ENST00000491629 KDM7AQ6ZMT4 941 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 TBC1D3Q8IZP1 549 aaPredicted RBP13.68□□□□□ -0.22
USF1-206ENST00000491629 MFSD2AQ8NA29 543 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 DQX1Q8TE96 717 aaKnown RBP13.68□□□□□ -0.22
USF1-206ENST00000491629 FRS2Q8WU20 508 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 NAF1Q96HR8 494 aaKnown RBP13.68□□□□□ -0.22
USF1-206ENST00000491629 HIC2Q96JB3 615 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 CPNE5Q9HCH3 593 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 UCKL1Q9NWZ5 548 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 HESX1Q9UBX0 185 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 CYTH4Q9UIA0 394 aa13.68□□□□□ -0.22
USF1-206ENST00000491629 DOCK4Q8N1I0 1966 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 LY6G6EA0A0G2JKS1 128 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 PYCARD-AS1I3L0S3 204 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 J3QKU1 62 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 ERVH48-1M5A8F1 160 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 LUC7L3O95232 432 aaKnown RBP13.67□□□□□ -0.22
USF1-206ENST00000491629 ADH1BP00325 375 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 MYL1P05976 194 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 C5AR1P21730 350 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 CMA1P23946 247 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 ACTN2P35609 894 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 ECT2LQ008S8 904 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 CDCP2Q5VXM1 449 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 SMYD4Q8IYR2 804 aaPredicted RBP13.67□□□□□ -0.22
USF1-206ENST00000491629 IRGQQ8WZA9 623 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 U3KQA8 63 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 UBR5O95071 2799 aaPredicted RBP13.67□□□□□ -0.22
USF1-206ENST00000491629 FLNCQ14315 2725 aa13.67□□□□□ -0.22
USF1-206ENST00000491629 TLN1Q9Y490 2541 aaKnown RBP13.66□□□□□ -0.22
USF1-206ENST00000491629 A0A1W2PNU3 283 aaPredicted RBP13.66□□□□□ -0.22
USF1-206ENST00000491629 CAPN9O14815 690 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 PLRG1O43660 514 aaKnown RBP13.66□□□□□ -0.22
USF1-206ENST00000491629 IL1BP01584 269 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 MYF5P13349 255 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
USF1-206ENST00000491629 TAS2R38P59533 333 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 SFSWAPQ12872 951 aaKnown RBP13.66□□□□□ -0.22
USF1-206ENST00000491629 CDH18Q13634 790 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 EDRF1Q3B7T1 1238 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 AGBL4Q5VU57 503 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 SYPL2Q5VXT5 272 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 IQCHQ86VS3 1027 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 OXR1Q8N573 874 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 ZNF557Q8N988 423 aaPredicted RBP13.66□□□□□ -0.22
USF1-206ENST00000491629 KAT5Q92993 513 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 USP25Q9UHP3 1055 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 NAALADL1Q9UQQ1 740 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 TLR6Q9Y2C9 796 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 SSUH2Q9Y2M2 353 aa13.66□□□□□ -0.22
USF1-206ENST00000491629 FAM237AA0A1B0GTK4 181 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 RNF103O00237 685 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 MOCS2O96007 188 aaPredicted RBP13.65□□□□□ -0.22
USF1-206ENST00000491629 MPOP05164 745 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 DGKAP23743 735 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 NDUFA8P51970 172 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 PITX1P78337 314 aaPredicted RBP13.65□□□□□ -0.22
USF1-206ENST00000491629 CNTN1Q12860 1018 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 LRMPQ12912 555 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 ZNF211Q13398 564 aaPredicted RBP13.65□□□□□ -0.22
USF1-206ENST00000491629 LY6DQ14210 128 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 ELAVL3Q14576 367 aaKnown RBP13.65□□□□□ -0.22
USF1-206ENST00000491629 POM121L1PQ3SYA9 428 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 ARHGAP40Q5TG30 622 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 RAP1GAP2Q684P5 730 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 ATL3Q6DD88 541 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 TAC4Q86UU9 113 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 TRIM69Q86WT6 500 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 CIR1Q86X95 450 aaPredicted RBP13.65□□□□□ -0.22
USF1-206ENST00000491629 LGI2Q8N0V4 545 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 TMEM145Q8NBT3 493 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 OR52K2Q8NGK3 314 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 TTC9Q92623 222 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 ALG14Q96F25 216 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms