RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ACSL1P33121 698 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 RECQLP46063 649 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 NSFP46459 744 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 SIM1P81133 766 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 TYRO3Q06418 890 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 KCNMA1Q12791 1236 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 FOXC1Q12948 553 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 KRT31Q15323 416 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 INAVAQ3KP66 663 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 SETD3Q86TU7 594 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 MMAAQ8IVH4 418 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 PGAP3Q96FM1 320 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 RPL10LQ96L21 214 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 C1orf74Q96LT6 269 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 CD93Q9NPY3 652 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 FANCLQ9NW38 375 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 TMEM63CQ9P1W3 806 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 INTS6Q9UL03 887 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 ITIH6Q6UXX5 1313 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 TTC34A8MYJ7 566 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 GFPT2O94808 682 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 RHOCP08134 193 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 PNMA6AP0CW24 399 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 SOX5P35711 763 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 CXCR3P49682 368 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 VASPP50552 380 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 CDR2Q01850 454 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 GRIK2Q13002 908 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 EIF4EBP2Q13542 120 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 C9orf64Q5T6V5 341 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 NAA35Q5VZE5 725 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 KIAA0895LQ68EN5 471 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 PPP1R2P3Q6NXS1 205 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 MMS22LQ6ZRQ5 1243 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 ARCQ7LC44 396 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 APCDD1Q8J025 514 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 OR2T34Q8NGX1 318 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 SETD7Q8WTS6 366 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 LMLNQ96KR4 655 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 HAPLN3Q96S86 360 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 NPY6RQ99463 290 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 PRMT1Q99873 361 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 NAA15Q9BXJ9 866 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 ACE2Q9BYF1 805 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 GAREM1Q9H706 876 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 DYRK4Q9NR20 520 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 SLCO3A1Q9UIG8 710 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 APOBEC2Q9Y235 224 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 HS3ST4Q9Y661 456 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 EML5Q05BV3 1969 aa17.04■□□□□ 0.32
PDLIM2-217ENST00000491330 MYO18AQ92614 2054 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 ZNF883P0CG24 379 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 C7P10643 843 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 GOT1P17174 413 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 SDC4P31431 198 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 NUDT1P36639 197 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 ETFBP38117 255 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 GRIA4P48058 902 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 PSMD8P48556 350 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 PITX1P78337 314 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 UBXN1Q04323 297 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 ZNF423Q2M1K9 1284 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 SKOR2Q2VWA4 1001 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 FILIP1LQ4L180 1135 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 RETSATQ6NUM9 610 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 DPY19L2P1Q6NXN4 242 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 NOP9Q86U38 636 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 XYLT1Q86Y38 959 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 OR14C36Q8NHC7 312 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 CPA5Q8WXQ8 436 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 BIRC7Q96CA5 298 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 MRGPRX3Q96LB0 322 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 CDC6Q99741 560 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 FEM1AQ9BSK4 669 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 C6orf106Q9H6K1 298 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 NLRC4Q9NPP4 1024 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 FSCN3Q9NQT6 498 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 PIGVQ9NUD9 493 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 SEPT11Q9NVA2 429 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 ARHGEF38Q9NXL2 777 aa17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 AJAP1Q9UKB5 411 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-217ENST00000491330 TBC1D3DA0A087WVF3 549 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TBC1D3IA0A087WXS9 549 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TBC1D3EA0A087X179 549 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TBC1D3KA0A087X1G2 549 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 A0A1W2PP55 124 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TBC1D3FA6NER0 549 aaPredicted RBP17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 LGALS16A8MUM7 142 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TBC1D3LB9A6J9 549 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 GIPC1O14908 333 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 ALOX15BO15296 676 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 MID1O15344 667 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 SLC7A4O43246 635 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 MAGEC1O60732 1142 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 CALB1P05937 261 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 MMEP08473 750 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TBC1D3HP0C7X1 549 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 OR1E1P30953 314 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 CTSOP43234 321 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms