RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 EDDM13A0A1B0GTR0 161 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 GFPT2O94808 682 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 LSM8O95777 96 aaKnown RBP18.54■□□□□ 0.56
HMGN1-219ENST00000491183 VAV1P15498 845 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 CHRNB2P17787 502 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 FLT3P36888 993 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 POLR2FP61218 127 aaKnown RBP18.54■□□□□ 0.56
HMGN1-219ENST00000491183 CST6Q15828 149 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 TTC31Q49AM3 519 aaPredicted RBP18.54■□□□□ 0.56
HMGN1-219ENST00000491183 FAM102AQ5T9C2 384 aaPredicted RBP18.54■□□□□ 0.56
HMGN1-219ENST00000491183 NAA35Q5VZE5 725 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 SASS6Q6UVJ0 657 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 USP30Q70CQ3 517 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 MMAAQ8IVH4 418 aaKnown RBP18.54■□□□□ 0.56
HMGN1-219ENST00000491183 ZNF683Q8IZ20 524 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 STK40Q8N2I9 435 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 FEM1AQ9BSK4 669 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 ZDHHC5Q9C0B5 715 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 NEUROG2Q9H2A3 272 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 SLC32A1Q9H598 525 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 SGK2Q9HBY8 427 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 NLRC4Q9NPP4 1024 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 TMPRSS4Q9NRS4 437 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 FAM207AQ9NSI2 230 aaPredicted RBP18.54■□□□□ 0.56
HMGN1-219ENST00000491183 ANO10Q9NW15 660 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 FBXL12Q9NXK8 326 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 STAP1Q9ULZ2 295 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 SCML1Q9UN30 329 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 SIK3Q9Y2K2 1263 aa18.54■□□□□ 0.56
HMGN1-219ENST00000491183 NYNRINQ9P2P1 1898 aaKnown RBP18.54■□□□□ 0.56
HMGN1-219ENST00000491183 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.53■□□□□ 0.56
HMGN1-219ENST00000491183 SPAARA0A1B0GVQ0 90 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 GOLGA8SH3BPF8 625 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 MID1O15344 667 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 RNASEH1O60930 286 aaKnown RBP18.53■□□□□ 0.56
HMGN1-219ENST00000491183 CNTN5O94779 1100 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 TOP3BO95985 862 aaKnown RBP18.53■□□□□ 0.56
HMGN1-219ENST00000491183 SLC8A1P32418 973 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 COPB1P53618 953 aaKnown RBP18.53■□□□□ 0.56
HMGN1-219ENST00000491183 OXCT1P55809 520 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 JAM2P57087 298 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 FAM193AP78312 1265 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 DEUP1Q05D60 604 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 SULT2A1Q06520 285 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 FOXC1Q12948 553 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 SLC14A1Q13336 389 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 ZNF177Q13360 481 aaPredicted RBP18.53■□□□□ 0.56
HMGN1-219ENST00000491183 SLC25A52Q3SY17 297 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 BRMS1LQ5PSV4 323 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 ARTNQ5T4W7 220 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 RNF219Q5W0B1 726 aaPredicted RBP18.53■□□□□ 0.56
HMGN1-219ENST00000491183 BNIPLQ7Z465 357 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 FRS2Q8WU20 508 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 SNX19Q92543 992 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 CAMK1GQ96NX5 476 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 ORAI3Q9BRQ5 295 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 IL21RQ9HBE5 538 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 LIMA1Q9UHB6 759 aaKnown RBP18.53■□□□□ 0.56
HMGN1-219ENST00000491183 NCKAP1Q9Y2A7 1128 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 TBC1D30Q9Y2I9 924 aa18.53■□□□□ 0.56
HMGN1-219ENST00000491183 A0A1B0GVT2 93 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 A0A1W2PP55 124 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 SH3BP5O60239 455 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 CLDN11O75508 207 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 FSBPO95073 299 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 F9P00740 461 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 CYP1A1P04798 512 aaPredicted RBP18.52■□□□□ 0.56
HMGN1-219ENST00000491183 IGHV4-34P06331 123 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 SOX5P35711 763 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 NNMTP40261 264 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 CSNK1EP49674 416 aaKnown RBP18.52■□□□□ 0.56
HMGN1-219ENST00000491183 GALCP54803 685 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 FMO1Q01740 532 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 CDR2Q01850 454 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 NCAPHQ15003 741 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 ALFQ53S48 1182 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 FKBP15Q5T1M5 1219 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 ZNF677Q86XU0 584 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 AADATQ8N5Z0 425 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 GANCQ8TET4 914 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 HSD3B7Q9H2F3 369 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 TM9SF3Q9HD45 589 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 ACACBO00763 2458 aa18.52■□□□□ 0.56
HMGN1-219ENST00000491183 LRRC10BA6NIK2 292 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 DRGXA6NNA5 263 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 C10orf142B7Z368 130 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 TPM2P07951 284 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 SPINK2P20155 84 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 CD27P26842 260 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 VASPP50552 380 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-219ENST00000491183 CDH4P55283 916 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 MYL5Q02045 173 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 SYCP1Q15431 976 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 KIAA0895LQ68EN5 471 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 SND1Q7KZF4 910 aaKnown RBP eCLIP18.51■□□□□ 0.55
HMGN1-219ENST00000491183 APTXQ7Z2E3 356 aaKnown RBP18.51■□□□□ 0.55
HMGN1-219ENST00000491183 C1orf74Q96LT6 269 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 CFAP57Q96MR6 1250 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 PPP1R9BQ96SB3 815 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 GAREM1Q9H706 876 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms