RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 GJB7Q6PEY0 223 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 FOXR2Q6PJQ5 311 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 SPATS2Q86XZ4 545 aaKnown RBP16.07■□□□□ 0.16
COL2A1-207ENST00000490609 OR2T34Q8NGX1 318 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 STK32AQ8WU08 396 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 ZNF606Q8WXB4 792 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 TSC1Q92574 1164 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 MED15Q96RN5 788 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 ELF4Q99607 663 aaPredicted RBP16.07■□□□□ 0.16
COL2A1-207ENST00000490609 CAAP1Q9H8G2 361 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 SCUBE2Q9NQ36 999 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 FZD4Q9ULV1 537 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 NCKAP1Q9Y2A7 1128 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 TRPM6Q9BX84 2022 aa16.07■□□□□ 0.16
COL2A1-207ENST00000490609 EDDM13A0A1B0GTR0 161 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 RNF103O00237 685 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 PSMA7O14818 248 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 LATO43561 262 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 TRUB2O95900 331 aaKnown RBP16.06■□□□□ 0.16
COL2A1-207ENST00000490609 GOT1P17174 413 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 PSMD8P48556 350 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 PLK1P53350 603 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 CCDC40Q4G0X9 1142 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 ZNF557Q8N988 423 aaPredicted RBP16.06■□□□□ 0.16
COL2A1-207ENST00000490609 NELFBQ8WX92 580 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 FAM149B1Q96BN6 582 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 ACE2Q9BYF1 805 aaPredicted RBP16.06■□□□□ 0.16
COL2A1-207ENST00000490609 INTS2Q9H0H0 1204 aaKnown RBP16.06■□□□□ 0.16
COL2A1-207ENST00000490609 ST7Q9NRC1 585 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 OR51B4Q9Y5P0 310 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 CHD5Q8TDI0 1954 aa16.06■□□□□ 0.16
COL2A1-207ENST00000490609 A0A087WV48 116 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 I6L893 689 aaPredicted RBP16.05■□□□□ 0.16
COL2A1-207ENST00000490609 DFNA5O60443 496 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 CD38P28907 300 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 NXPH1P58417 271 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 ST8SIA6P61647 398 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 YWHAZP63104 245 aaKnown RBP16.05■□□□□ 0.16
COL2A1-207ENST00000490609 CDH18Q13634 790 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 ACAP1Q15027 740 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 KLHL10Q6JEL2 608 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 CCAR2Q8N163 923 aaKnown RBP16.05■□□□□ 0.16
COL2A1-207ENST00000490609 GALNT15Q8N3T1 639 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 GANCQ8TET4 914 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 OMDQ99983 421 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 DDX50Q9BQ39 737 aaKnown RBP16.05■□□□□ 0.16
COL2A1-207ENST00000490609 POPDC2Q9HBU9 364 aa16.05■□□□□ 0.16
COL2A1-207ENST00000490609 COL27A1Q8IZC6 1860 aaPredicted RBP16.05■□□□□ 0.16
COL2A1-207ENST00000490609 LRRC72A6NJI9 287 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 LETM1O95202 739 aaPredicted RBP16.04■□□□□ 0.16
COL2A1-207ENST00000490609 PDGFRAP16234 1089 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 C5AR1P21730 350 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 ACADSBP45954 432 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 VASPP50552 380 aaPredicted RBP16.04■□□□□ 0.16
COL2A1-207ENST00000490609 STX17P56962 302 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 MEA1Q16626 185 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 CCDC157Q569K6 752 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 SFMBT2Q5VUG0 894 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 OTUD1Q5VV17 481 aaPredicted RBP16.04■□□□□ 0.16
COL2A1-207ENST00000490609 FBXL22Q6P050 247 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 SND1Q7KZF4 910 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL2A1-207ENST00000490609 ADAT2Q7Z6V5 191 aaKnown RBP16.04■□□□□ 0.16
COL2A1-207ENST00000490609 C14orf80Q86SX3 495 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 PDCD7Q8N8D1 485 aaKnown RBP16.04■□□□□ 0.16
COL2A1-207ENST00000490609 OR14C36Q8NHC7 312 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 CCDC34Q96HJ3 373 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 LRIG1Q96JA1 1093 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 BTN2A3PQ96KV6 586 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 SLC2A13Q96QE2 648 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 CPXM1Q96SM3 734 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 UBE2TQ9NPD8 197 aaPredicted RBP16.04■□□□□ 0.16
COL2A1-207ENST00000490609 ANLNQ9NQW6 1124 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 FTSJ1Q9UET6 329 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 AJAP1Q9UKB5 411 aaPredicted RBP16.04■□□□□ 0.16
COL2A1-207ENST00000490609 CTNND2Q9UQB3 1225 aa16.04■□□□□ 0.16
COL2A1-207ENST00000490609 FLNBO75369 2602 aaKnown RBP16.03■□□□□ 0.16
COL2A1-207ENST00000490609 TLR4O00206 839 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 ENC1O14682 589 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 RNASEH1O60930 286 aaKnown RBP16.03■□□□□ 0.16
COL2A1-207ENST00000490609 RTN2O75298 545 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 SLC9A1P19634 815 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 EPHA8P29322 1005 aaPredicted RBP16.03■□□□□ 0.16
COL2A1-207ENST00000490609 RXRGP48443 463 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 ACADVLP49748 655 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 C21orf59P57076 290 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 TAS2R38P59533 333 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 CENPCQ03188 943 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 PDCLQ13371 301 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 DPY19L2P1Q6NXN4 242 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.03■□□□□ 0.16
COL2A1-207ENST00000490609 TMPRSS12Q86WS5 348 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 CHSY1Q86X52 802 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 IRF2BP1Q8IU81 584 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 DEFB106AQ8N104 65 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 EID2Q8N6I1 236 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 SERAC1Q96JX3 654 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 SRRTQ9BXP5 876 aaKnown RBP16.03■□□□□ 0.16
COL2A1-207ENST00000490609 GTPBP4Q9BZE4 634 aaKnown RBP16.03■□□□□ 0.16
COL2A1-207ENST00000490609 THAP9Q9H5L6 903 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 PPM1HQ9ULR3 514 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms