RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 ACADSBP45954 432 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 VPS41P49754 854 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 MNAT1P51948 309 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 YARSP54577 528 aaKnown RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 GDF10P55107 478 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 EIF3EP60228 445 aaKnown RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 SARNPP82979 210 aaKnown RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 OTUD4Q01804 1114 aaKnown RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 NRG1Q02297 640 aaPredicted RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 SLC25A11Q02978 314 aaKnown RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 ARHGAP1Q07960 439 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 PDIA2Q13087 525 aaKnown RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 USP4Q13107 963 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 DPYSL3Q14195 570 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 SNCBQ16143 134 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 HIF1AQ16665 826 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 PTPN20Q4JDL3 420 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 ATP13A4Q4VNC1 1196 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 CCDC38Q502W7 563 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 SEZ6Q53EL9 994 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 ZNF394Q53GI3 561 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 HHATQ5VTY9 493 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 EEF1DP3Q658K8 133 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 NUGGCQ68CJ6 796 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 ANKRD54Q6NXT1 300 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 DARS2Q6PI48 645 aaKnown RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 C19orf48Q6RUI8 117 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 MTHFD1LQ6UB35 978 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 VSTM1Q6UX27 236 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 EEPD1Q7L9B9 569 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 SPATA21Q7Z572 469 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 TMEM110Q86TL2 294 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 RBM23Q86U06 439 aaKnown RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 XYLT1Q86Y38 959 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 TRIM42Q8IWZ5 723 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 LRRC71Q8N4P6 559 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 LRRC52Q8N7C0 313 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 LINC01465Q8N7H1 131 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 C1orf127Q8N9H9 656 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 CCDC63Q8NA47 563 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 BEST2Q8NFU1 509 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 ACTL9Q8TC94 416 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 ACSF2Q96CM8 615 aaPredicted RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 LRRC39Q96DD0 335 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 C9orf72Q96LT7 481 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 UBL7Q96S82 380 aaPredicted RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 CYTH2Q99418 400 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 FERMT1Q9BQL6 677 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 HERPUD2Q9BSE4 406 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 PITPNM3Q9BZ71 974 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 GCOM2Q9BZD3 368 aaPredicted RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 OSBPL7Q9BZF2 842 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 TRABDQ9H4I3 376 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 ACSS3Q9H6R3 686 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 VPS37BQ9H9H4 285 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 RXFP1Q9HBX9 757 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 LRRC4CQ9HCJ2 640 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 SLC40A1Q9NP59 571 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 PNPLA8Q9NP80 782 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 TMEM51Q9NW97 253 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 DPP3Q9NY33 737 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 EURLQ9NYK6 297 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 PAK5Q9P286 719 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 PSMC3IPQ9P2W1 217 aaPredicted RBP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 HESX1Q9UBX0 185 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPRK-213ENST00000490332 AGAP1Q9UPQ3 857 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 WASF3Q9UPY6 502 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 AKT3Q9Y243 479 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 USH1CQ9Y6N9 552 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 COL6A6A6NMZ7 2263 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 LCTP09848 1927 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 GREB1Q4ZG55 1949 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 PATJQ8NI35 1801 aa5.23□□□□□ -1.57
PTPRK-213ENST00000490332 APC2O95996 2303 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 A0A087WZ62 844 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 BCLAF3A2AJT9 711 aaKnown RBP5.22□□□□□ -1.57
PTPRK-213ENST00000490332 C3orf70A6NLC5 250 aaPredicted RBP5.22□□□□□ -1.57
PTPRK-213ENST00000490332 C2CD4BA6NLJ0 364 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 ANKRD65E5RJM6 399 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 POC1B-GALNT4F8VUJ3 575 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 H3BRB1 525 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 M0QYV0 167 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 APOL1O14791 398 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 PPP1R12AO14974 1030 aaPredicted RBP5.22□□□□□ -1.57
PTPRK-213ENST00000490332 CHADO15335 359 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 TREHO43280 583 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 MGRN1O60291 552 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 CSPG5O95196 566 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 ARIH2O95376 493 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 ASMTLO95671 621 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 OAS1P00973 400 aaKnown RBP5.22□□□□□ -1.57
PTPRK-213ENST00000490332 IFNB1P01574 187 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 ITGB3P05106 788 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 EDN1P05305 212 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 DCNP07585 359 aaKnown RBP5.22□□□□□ -1.57
PTPRK-213ENST00000490332 MMP3P08254 477 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 MYL3P08590 195 aa5.22□□□□□ -1.57
PTPRK-213ENST00000490332 CXCL8P10145 99 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms