RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 NOP9Q86U38 636 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 CHSY1Q86X52 802 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 RGL4Q8IZJ4 473 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 DEFB124Q8NES8 71 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 OR52K2Q8NGK3 314 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 OR2I1PQ8NGU4 316 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 BIRC7Q96CA5 298 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 C18orf8Q96DM3 657 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 C1orf74Q96LT6 269 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 FEM1AQ9BSK4 669 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 GANQ9H2C0 597 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 C6orf106Q9H6K1 298 aaPredicted RBP10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 PIGVQ9NUD9 493 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 EIF2B4Q9UI10 523 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 HS3ST4Q9Y661 456 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 SLCO1B1Q9Y6L6 691 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 ADAMTS9Q9P2N4 1935 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 IGLV3-10A0A075B6K4 115 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 EDDM13A0A1B0GTR0 161 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 TTC34A8MYJ7 566 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 H0Y626 953 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 M0QYT0 321 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 ATP9BO43861 1147 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 GRAP2O75791 330 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 MOCS3O95396 460 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 SEMA4FO95754 770 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 F9P00740 461 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 DNTTP04053 509 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 CYP1A1P04798 512 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 IGHV4-34P06331 123 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 CHRNB2P17787 502 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 TFE3P19532 575 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 ABCB4P21439 1286 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 CD27P26842 260 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 MZF1P28698 734 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 IRAK1P51617 712 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 GALCP54803 685 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 JAM2P57087 298 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 ST8SIA6P61647 398 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 ZNF252P-AS1Q0IIN9 211 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 KRT31Q15323 416 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 CST6Q15828 149 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 SLC25A52Q3SY17 297 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 HSP90AA4PQ58FG1 418 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 BRMS1LQ5PSV4 323 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 ACBD5Q5T8D3 534 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 TRNP1Q6NT89 227 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 APTXQ7Z2E3 356 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 C14orf80Q86SX3 495 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 GLRX5Q86SX6 157 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 XYLT1Q86Y38 959 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 CCDC117Q8IWD4 279 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 HDDC3Q8N4P3 179 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 ZCCHC9Q8N567 271 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 PPP1R9BQ96SB3 815 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 GTPBP2Q9BX10 602 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 BTBD1Q9H0C5 482 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 HSD3B7Q9H2F3 369 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 SLC32A1Q9H598 525 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 FAM204AQ9H8W3 233 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 ZNF212Q9UDV6 495 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 SERGEFQ9UGK8 458 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 NOCTQ9UK39 431 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 FZD4Q9ULV1 537 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 SIK3Q9Y2K2 1263 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 DAAM1Q9Y4D1 1078 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 CEP83Q9Y592 693 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 PCDHGB2Q9Y5G2 931 aa10.02□□□□□ -0.81
TMEM39A-210ENST00000490099 MEI4A8MW99 385 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 CLDN11O75508 207 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 ADCY5O95622 1261 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 PDGFRAP16234 1089 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 ZNF18P17022 549 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 C5AR1P21730 350 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 MMP8P22894 467 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 SLC8A1P32418 973 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 GRIA4P48058 902 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 AFF3P51826 1226 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 ATXN3P54252 364 aaPredicted RBP10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 NOMO3P69849 1222 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 FAM193AP78312 1265 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 ELAVL3Q14576 367 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 NCAPHQ15003 741 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 TTC31Q49AM3 519 aaPredicted RBP10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 RABGAP1LQ5R372 815 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 KIAA0895LQ68EN5 471 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 IL27RAQ6UWB1 636 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 FAM124AQ86V42 546 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 ERICH1Q86X53 443 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 CIR1Q86X95 450 aaPredicted RBP10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 ZNF677Q86XU0 584 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 DHX40Q8IX18 779 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 AADATQ8N5Z0 425 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 NEUROG2Q9H2A3 272 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 TM9SF3Q9HD45 589 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 FANCLQ9NW38 375 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 FBXL12Q9NXK8 326 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 TAB2Q9NYJ8 693 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms