RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 WASH4PA8MWX3 477 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 E7ENQ6 273 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 PIK3R2O00459 728 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CLDN5O00501 218 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 NDUFAB1O14561 156 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 NRP1O14786 923 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 DCLK1O15075 740 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 TM9SF1O15321 606 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 IRAK2O43187 625 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 FAM155BO75949 473 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 KIAA0754O94854 1291 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 ARHGEF15O94989 841 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 ZWINTO95229 277 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 FAM107AO95990 144 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 IGLV3-25P01717 112 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 INHBAP08476 426 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CD48P09326 243 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CLTBP09497 229 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CSH1P0DML2 217 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CSH2P0DML3 217 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 GOT1P17174 413 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 PFKLP17858 780 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 KRT15P19012 456 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CES1P23141 567 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CCNCP24863 283 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 RBL1P28749 1068 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 EPHB2P29323 1055 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 HOXC13P31276 330 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 HPDP32754 393 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 LSP1P33241 339 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 ETFBP38117 255 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 NPY2RP49146 381 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 TUBP50607 506 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 NDST2P52849 883 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 SEMA3BQ13214 749 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 DPYSQ14117 519 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 KCNJ11Q14654 390 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 PRKD1Q15139 912 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 TAF5Q15542 800 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 TAF12Q16514 161 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 DBN1Q16643 649 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 BBS9Q3SYG4 887 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 PABPC1LQ4VXU2 614 aaKnown RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CLLU1OSQ5K130 101 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 RNFT1Q5M7Z0 435 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 SH3PXD2AQ5TCZ1 1133 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 GKAP1Q5VSY0 366 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 FAM171A1Q5VUB5 890 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 KIAA0319Q5VV43 1072 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 ZNF385CQ66K41 422 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 NCBP2-AS2Q69YL0 99 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 TRNP1Q6NT89 227 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 FUT10Q6P4F1 479 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 LRRC8BQ6P9F7 803 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 RIPOR1Q6ZS17 1223 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 C3orf62Q6ZUJ4 267 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 RTN4RL1Q86UN2 441 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 LRRC6Q86X45 466 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CCDC117Q8IWD4 279 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 SCN4BQ8IWT1 228 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CCDC13Q8IYE1 715 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 BBS5Q8N3I7 341 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 TMEM199Q8N511 208 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CCDC185Q8N715 623 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 GBP7Q8N8V2 638 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 KDF1Q8NAX2 398 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CCNYQ8ND76 341 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 BCAS4Q8TDM0 211 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 DQX1Q8TE96 717 aaKnown RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 MYLIPQ8WY64 445 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 RIN2Q8WYP3 895 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 ATP2A3Q93084 1043 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 FBXO32Q969P5 355 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 AZIN2Q96A70 460 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CHMP6Q96FZ7 201 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 TMEM169Q96HH4 297 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 PIWIL1Q96J94 861 aaKnown RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 BTN2A3PQ96KV6 586 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CASD1Q96PB1 797 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 KCNK16Q96T55 309 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CDX2Q99626 313 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 RTP3Q9BQQ7 232 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 HERPUD2Q9BSE4 406 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 TKTL2Q9H0I9 626 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 CXCL16Q9H2A7 254 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 LRRC40Q9H9A6 602 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 WDR6Q9NNW5 1121 aaKnown RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 PRDM6Q9NQX0 595 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 ENAMQ9NRM1 1142 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 PIGVQ9NUD9 493 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 ETNK2Q9NVF9 386 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 DTLQ9NZJ0 730 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 NAALADL1Q9UQQ1 740 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 HBS1LQ9Y450 684 aaKnown RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 PCDHB11Q9Y5F2 797 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 TIMM13Q9Y5L4 95 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 SCN1AP35498 2009 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 GOLGA6L7A0A1B0GV03 622 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 A0A1W2PRU2 124 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 FAM47DPA6NHR8 397 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms