RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 CSF2RAP15509 400 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 GRIK1P39086 918 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 OTUD4Q01804 1114 aaKnown RBP18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 DHX34Q14147 1143 aaKnown RBP18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 SYCP2LQ5T4T6 812 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 FAM171BQ6P995 826 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 RSPO2Q6UXX9 243 aaPredicted RBP18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 B3GNT6Q6ZMB0 384 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 ATAD1Q8NBU5 361 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 DGCR14Q96DF8 476 aaKnown RBP18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 GRHL1Q9NZI5 618 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 DKK3Q9UBP4 350 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 CARD8Q9Y2G2 431 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 KDM1AO60341 852 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 RPL17P18621 184 aaKnown RBP18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 ACADSBP45954 432 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 YWHAZP63104 245 aaKnown RBP18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 TSPY1Q01534 308 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 MTM1Q13496 603 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 DPYSL3Q14195 570 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 PRSS55Q6UWB4 352 aaPredicted RBP18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 ZDHHC24Q6UX98 284 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 POLNQ7Z5Q5 900 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 SPATA2LQ8IUW3 424 aaPredicted RBP18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 THEM5Q8N1Q8 247 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 SLC7A14Q8TBB6 771 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 ACTL9Q8TC94 416 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 ADAM28Q9UKQ2 775 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 SLC27A5Q9Y2P5 690 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 NR2E3Q9Y5X4 410 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 CHD7Q9P2D1 2997 aa18.66■□□□□ 0.58
POLR2J3-205ENST00000489144 M0QYT0 321 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 MATN2O00339 956 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 CAPN9O14815 690 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 LIASO43766 372 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 NCAM1P13591 858 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 GDF10P55107 478 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 DEFB103AP81534 67 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 TBL3Q12788 808 aaKnown RBP18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 CCDC25Q86WR0 208 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 WDR75Q8IWA0 830 aaKnown RBP18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 ZBED8Q8IZ13 594 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 UHMK1Q8TAS1 419 aaKnown RBP18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 MRPL46Q9H2W6 279 aaKnown RBP18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 CLIC5Q9NZA1 410 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 PCDHB8Q9UN66 801 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 SMIM23A6NLE4 172 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 INPPL1O15357 1258 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 AGTP01019 485 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 CETN2P41208 172 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 RPL34P49207 117 aaKnown RBP18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 MGAT5Q09328 741 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 RTP2Q5QGT7 225 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 Q6ZNX1 250 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 VSIG1Q86XK7 387 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 NPAS4Q8IUM7 802 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 C12orf50Q8NA57 414 aaPredicted RBP18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 MAK16Q9BXY0 300 aaKnown RBP18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 DNAI2Q9GZS0 605 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 PIGVQ9NUD9 493 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 ATAD3AQ9NVI7 634 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 TBX21Q9UL17 535 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 PRELID1Q9Y255 219 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 SNX10Q9Y5X0 201 aa18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 ZNF638Q14966 1978 aaKnown RBP18.65■□□□□ 0.58
POLR2J3-205ENST00000489144 COL6A1P12109 1028 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 EPHB2P29323 1055 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 MATKP42679 507 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 RASSF2P50749 326 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 DAOAP59103 153 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 RELAQ04206 551 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 CTXN3Q4LDR2 81 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 CMASQ8NFW8 434 aaPredicted RBP18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 TRIM43Q96BQ3 446 aaPredicted RBP18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 CCT7Q99832 543 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 TPK1Q9H3S4 243 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 ANLNQ9NQW6 1124 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 DPYSL4O14531 572 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 HGSO14964 777 aaPredicted RBP18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 RGS16O15492 202 aaPredicted RBP18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 CBFA2T3O75081 653 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 STK10O94804 968 aaKnown RBP18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 OXSR1O95747 527 aaPredicted RBP18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 COL6A2P12110 1019 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 IL4RP24394 825 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 CLUL1Q15846 466 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 FBXO46Q6PJ61 603 aaPredicted RBP18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 ZDHHC17Q8IUH5 632 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 NUP93Q8N1F7 819 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 ZDHHC18Q9NUE0 388 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 KANSL3Q9P2N6 904 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 HAO1Q9UJM8 370 aa18.64■□□□□ 0.57
POLR2J3-205ENST00000489144 TANC1Q9C0D5 1861 aa18.63■□□□□ 0.57
POLR2J3-205ENST00000489144 FAM187AA6NFU0 413 aa18.63■□□□□ 0.57
POLR2J3-205ENST00000489144 E9PBE3 544 aa18.63■□□□□ 0.57
POLR2J3-205ENST00000489144 ZBED1O96006 694 aa18.63■□□□□ 0.57
POLR2J3-205ENST00000489144 GALTP07902 379 aa18.63■□□□□ 0.57
POLR2J3-205ENST00000489144 CLTBP09497 229 aa18.63■□□□□ 0.57
POLR2J3-205ENST00000489144 NUDT17P0C025 328 aa18.63■□□□□ 0.57
POLR2J3-205ENST00000489144 ADCY8P40145 1251 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms