RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 INSIG1O15503 277 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 MSI1O43347 362 aaKnown RBP4.08□□□□□ -1.76
RFC4-213ENST00000489028 ALPLP05186 524 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 LYL1P12980 280 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 HTR6P50406 440 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 NANOS2P60321 138 aaKnown RBP4.08□□□□□ -1.76
RFC4-213ENST00000489028 RHAGQ02094 409 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 PPATQ06203 517 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 CHAF1AQ13111 956 aaPredicted RBP4.08□□□□□ -1.76
RFC4-213ENST00000489028 BLMHQ13867 455 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 TRIM14Q14142 442 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 MORC3Q14149 939 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 SEMA3AQ14563 771 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 PTGR1Q14914 329 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 LRRC24Q50LG9 513 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 ENTPD8Q5MY95 495 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 C10orf76Q5T2E6 689 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 TANGO2Q6ICL3 276 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 JMJD6Q6NYC1 403 aaPredicted RBP4.08□□□□□ -1.76
RFC4-213ENST00000489028 ZNF549Q6P9A3 640 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 CCDC174Q6PII3 467 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 ZNF517Q6ZMY9 492 aaPredicted RBP4.08□□□□□ -1.76
RFC4-213ENST00000489028 CYB5R4Q7L1T6 521 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 RASGRP2Q7LDG7 609 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 KDELC2Q7Z4H8 507 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 TMEM174Q8WUU8 243 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 BRD8Q9H0E9 1235 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 ANAPC4Q9UJX5 808 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 KCND3Q9UK17 655 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 TNFSF13BQ9Y275 285 aa4.08□□□□□ -1.76
RFC4-213ENST00000489028 TCRBV7S3A2A0A539 114 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 NPIPB13A6NJU9 1138 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 NPIPB5A8MRT5 1133 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 EFCAB8A8MWE9 144 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 NPIPB4C9JG80 1138 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 H0Y3Z8 333 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 OAZ2O95190 189 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 SNHG28P0DPA3 235 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 SERPINA4P29622 427 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 POLD2P49005 469 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 PRKAA2P54646 552 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 P2RX3P56373 397 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 PMPCAQ10713 525 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 DCTN1Q14203 1278 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 GALNT3Q14435 633 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 TBRG1Q3YBR2 411 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 CCDC38Q502W7 563 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 TTC39AQ5SRH9 613 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 SLC30A9Q6PML9 568 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 RNF144BQ7Z419 303 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 TMEM200AQ86VY9 491 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 ZDHHC17Q8IUH5 632 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 OTUD7AQ8TE49 926 aaPredicted RBP4.07□□□□□ -1.76
RFC4-213ENST00000489028 C3orf49Q96BT1 292 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 ZNF419Q96HQ0 510 aaPredicted RBP4.07□□□□□ -1.76
RFC4-213ENST00000489028 DDX23Q9BUQ8 820 aaKnown RBP4.07□□□□□ -1.76
RFC4-213ENST00000489028 PDE11AQ9HCR9 933 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 SLC22A11Q9NSA0 550 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 ARL15Q9NXU5 204 aa4.07□□□□□ -1.76
RFC4-213ENST00000489028 KRTAP29-1A8MX34 341 aaPredicted RBP4.06□□□□□ -1.76
RFC4-213ENST00000489028 PROB1E7EW31 1015 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 H0YGN5 161 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 IPO5O00410 1097 aaKnown RBP4.06□□□□□ -1.76
RFC4-213ENST00000489028 MDM4O15151 490 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 ZC3H11AO75152 810 aaKnown RBP eCLIP4.06□□□□□ -1.76
RFC4-213ENST00000489028 SYF2O95926 243 aaKnown RBP4.06□□□□□ -1.76
RFC4-213ENST00000489028 IFNA2P01563 188 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 THBS3P49746 956 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 CDK18Q07002 472 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 FOXO1Q12778 655 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 PDCLQ13371 301 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 RPS6KA2Q15349 733 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 DGAT2L7PQ6IED9 249 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 ERAP2Q6P179 960 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 SYNE3Q6ZMZ3 975 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 ANKS1BQ7Z6G8 1248 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 MYLK4Q86YV6 388 aaPredicted RBP4.06□□□□□ -1.76
RFC4-213ENST00000489028 KLBQ86Z14 1044 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 CCDC117Q8IWD4 279 aaPredicted RBP4.06□□□□□ -1.76
RFC4-213ENST00000489028 ENDOVQ8N8Q3 282 aaKnown RBP4.06□□□□□ -1.76
RFC4-213ENST00000489028 CPT1BQ92523 772 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 ARRDC3Q96B67 414 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 TRAPPC9Q96Q05 1148 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 HERC2P3Q9BVR0 1158 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 Q9N2J8 555 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 FZD3Q9NPG1 666 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 TMEM248Q9NWD8 314 aa4.06□□□□□ -1.76
RFC4-213ENST00000489028 SRP68Q9UHB9 627 aaKnown RBP4.06□□□□□ -1.76
RFC4-213ENST00000489028 TRBV5-7A0A0A0MS05 114 aa4.05□□□□□ -1.76
RFC4-213ENST00000489028 ACP5P13686 325 aa4.05□□□□□ -1.76
RFC4-213ENST00000489028 TYK2P29597 1187 aa4.05□□□□□ -1.76
RFC4-213ENST00000489028 AVPR2P30518 371 aa4.05□□□□□ -1.76
RFC4-213ENST00000489028 ARRB2P32121 409 aa4.05□□□□□ -1.76
RFC4-213ENST00000489028 POLE2P56282 527 aa4.05□□□□□ -1.76
RFC4-213ENST00000489028 PKP1Q13835 747 aa4.05□□□□□ -1.76
RFC4-213ENST00000489028 RAPGEF1Q13905 1077 aa4.05□□□□□ -1.76
RFC4-213ENST00000489028 TIGD6Q17RP2 521 aa4.05□□□□□ -1.76
RFC4-213ENST00000489028 DAB2IPQ5VWQ8 1189 aa4.05□□□□□ -1.76
RFC4-213ENST00000489028 MTFR2Q6P444 385 aa4.05□□□□□ -1.76
RFC4-213ENST00000489028 SYT13Q7L8C5 426 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms