RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 NUCB2P80303 420 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 SULT2A1Q06520 285 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 C19orf57Q0VDD7 668 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 OVGP1Q12889 678 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 PNOCQ13519 176 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 HES3Q5TGS1 186 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 SFMBT2Q5VUG0 894 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 IQCHQ86VS3 1027 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 STK40Q8N2I9 435 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 BAP1Q92560 729 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 NAALADL1Q9UQQ1 740 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 ZDHHC9Q9Y397 364 aa19.69■□□□□ 0.74
GGPS1-206ENST00000488594 PLXNA2O75051 1894 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 TBC1D3DA0A087WVF3 549 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 TBC1D3IA0A087WXS9 549 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 TBC1D3EA0A087X179 549 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 TBC1D3KA0A087X1G2 549 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 TBC1D3FA6NER0 549 aaPredicted RBP19.68■□□□□ 0.74
GGPS1-206ENST00000488594 TBC1D3LB9A6J9 549 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 RNF225M0QZC1 329 aaPredicted RBP19.68■□□□□ 0.74
GGPS1-206ENST00000488594 MOCS2O96007 188 aaPredicted RBP19.68■□□□□ 0.74
GGPS1-206ENST00000488594 TBC1D3HP0C7X1 549 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 ACADSBP45954 432 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 RPL34P49207 117 aaKnown RBP19.68■□□□□ 0.74
GGPS1-206ENST00000488594 PMS1P54277 932 aaKnown RBP19.68■□□□□ 0.74
GGPS1-206ENST00000488594 SEMG2Q02383 582 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 TBC1D3GQ6DHY5 549 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 TBC1D3CQ6IPX1 549 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 DSG4Q86SJ6 1040 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 PRPF39Q86UA1 669 aaKnown RBP19.68■□□□□ 0.74
GGPS1-206ENST00000488594 TAC4Q86UU9 113 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 TBC1D3Q8IZP1 549 aaPredicted RBP19.68■□□□□ 0.74
GGPS1-206ENST00000488594 LGI2Q8N0V4 545 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 CACTIN-AS1Q8N1I8 211 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 BTN2A3PQ96KV6 586 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 SPAG5Q96R06 1193 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 DMTF1Q9Y222 760 aa19.68■□□□□ 0.74
GGPS1-206ENST00000488594 CAPN9O14815 690 aa19.67■□□□□ 0.74
GGPS1-206ENST00000488594 SMC2O95347 1197 aa19.67■□□□□ 0.74
GGPS1-206ENST00000488594 CKMT2P17540 419 aa19.67■□□□□ 0.74
GGPS1-206ENST00000488594 ITPKBP27987 946 aa19.67■□□□□ 0.74
GGPS1-206ENST00000488594 OXCT1P55809 520 aa19.67■□□□□ 0.74
GGPS1-206ENST00000488594 TTC39BQ5VTQ0 682 aaPredicted RBP19.67■□□□□ 0.74
GGPS1-206ENST00000488594 CHSY1Q86X52 802 aa19.67■□□□□ 0.74
GGPS1-206ENST00000488594 APCDD1Q8J025 514 aa19.67■□□□□ 0.74
GGPS1-206ENST00000488594 LSM14AQ8ND56 463 aaKnown RBP19.67■□□□□ 0.74
GGPS1-206ENST00000488594 SNIP1Q8TAD8 396 aaKnown RBP19.67■□□□□ 0.74
GGPS1-206ENST00000488594 ADAM32Q8TC27 787 aa19.67■□□□□ 0.74
GGPS1-206ENST00000488594 FAM131CQ96AQ9 280 aa19.67■□□□□ 0.74
GGPS1-206ENST00000488594 RPL10LQ96L21 214 aaKnown RBP19.67■□□□□ 0.74
GGPS1-206ENST00000488594 PRORYQ9H606 182 aa19.67■□□□□ 0.74
GGPS1-206ENST00000488594 ST7Q9NRC1 585 aa19.67■□□□□ 0.74
GGPS1-206ENST00000488594 F5H5T6 163 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 ATXN7O15265 892 aaPredicted RBP19.66■□□□□ 0.74
GGPS1-206ENST00000488594 P4HA2O15460 535 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 TACR2P21452 398 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 DRD3P35462 400 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 GPD2P43304 727 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 CLDN6P56747 220 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 PPP2CBP62714 309 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 PPP2CAP67775 309 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 GCNT1Q02742 428 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 FAM46CQ5VWP2 391 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 RAP1GAP2Q684P5 730 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.66■□□□□ 0.74
GGPS1-206ENST00000488594 STK32AQ8WU08 396 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 RFFLQ8WZ73 363 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 CEP63Q96MT8 703 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 PPP1R9BQ96SB3 815 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 SLC12A6Q9UHW9 1150 aa19.66■□□□□ 0.74
GGPS1-206ENST00000488594 XPO7Q9UIA9 1087 aaKnown RBP19.66■□□□□ 0.74
GGPS1-206ENST00000488594 GCN1Q92616 2671 aaKnown RBP19.65■□□□□ 0.74
GGPS1-206ENST00000488594 TRIM49BA6NDI0 452 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 PSMA7O14818 248 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 TLX3O43711 291 aaPredicted RBP19.65■□□□□ 0.74
GGPS1-206ENST00000488594 STK19P49842 368 aaPredicted RBP19.65■□□□□ 0.74
GGPS1-206ENST00000488594 VASPP50552 380 aaPredicted RBP19.65■□□□□ 0.74
GGPS1-206ENST00000488594 PLK1P53350 603 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 BNIP3Q12983 259 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 STIM1Q13586 685 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 MEA1Q16626 185 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 ZC3H12AQ5D1E8 599 aaKnown RBP19.65■□□□□ 0.74
GGPS1-206ENST00000488594 SYPL2Q5VXT5 272 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 KANSL1Q7Z3B3 1105 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 SPATS2Q86XZ4 545 aaKnown RBP19.65■□□□□ 0.74
GGPS1-206ENST00000488594 SPATA20Q8TB22 786 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 SLC39A7Q92504 469 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 KAT5Q92993 513 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 POPDC2Q9HBU9 364 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.65■□□□□ 0.74
GGPS1-206ENST00000488594 ARHGAP20Q9P2F6 1191 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 CYTH4Q9UIA0 394 aa19.65■□□□□ 0.74
GGPS1-206ENST00000488594 PLRG1O43660 514 aaKnown RBP19.64■□□□□ 0.73
GGPS1-206ENST00000488594 ACP1P24666 158 aa19.64■□□□□ 0.73
GGPS1-206ENST00000488594 STAT4Q14765 748 aa19.64■□□□□ 0.73
GGPS1-206ENST00000488594 TRIM69Q86WT6 500 aa19.64■□□□□ 0.73
GGPS1-206ENST00000488594 FMR1NBQ8N0W7 255 aaPredicted RBP19.64■□□□□ 0.73
GGPS1-206ENST00000488594 ATP6V0D2Q8N8Y2 350 aa19.64■□□□□ 0.73
GGPS1-206ENST00000488594 LMO3Q8TAP4 145 aa19.64■□□□□ 0.73
GGPS1-206ENST00000488594 FRS2Q8WU20 508 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms