RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 CACNA2D3Q8IZS8 1091 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 UMODL1-AS1Q8N2C9 162 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 LRRC43Q8N309 656 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 PPM1NQ8N819 430 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 RTL3Q8N8U3 475 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 STKLD1Q8NE28 680 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 GDAP1Q8TB36 358 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 DEPDC1BQ8WUY9 529 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 FATE1Q969F0 183 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 FBXO32Q969P5 355 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 MTBPQ96DY7 904 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 CELF6Q96J87 481 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 SERAC1Q96JX3 654 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 AGAP3Q96P47 875 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 FCRL5Q96RD9 977 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 IL12RB2Q99665 862 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 ELAC2Q9BQ52 826 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 MLPHQ9BV36 600 aaPredicted RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 VN1R3Q9BXE9 311 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 CEP41Q9BYV8 373 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 UBE2OQ9C0C9 1292 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 GBA3Q9H227 469 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 NOL6Q9H6R4 1146 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 CATSPERBQ9H7T0 1116 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 MLXIPLQ9NP71 852 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 PRDM5Q9NQX1 630 aaPredicted RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 TLR8Q9NR97 1041 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 MTRRQ9UBK8 725 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 TBX21Q9UL17 535 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 ATXN2Q99700 1313 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 IGLV3-10A0A075B6K4 115 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 HMX2A2RU54 273 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 ARHGAP42A6NI28 874 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 SLC38A8A6NNN8 435 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 TRIM49D1C9J1S8 452 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 AP3B1O00203 1094 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 DFFAO00273 331 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 TM9SF1O15321 606 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 SNX3O60493 162 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 UGT1A9O60656 530 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 RFPL1O75677 317 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 KRT37O76014 449 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 ABLIM3O94929 683 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 UPP2O95045 317 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 OAS1P00973 400 aaKnown RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 DHRS4L1P0CG22 281 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 CSH1P0DML2 217 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 CSH2P0DML3 217 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 NFKB1P19838 968 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 CA4P22748 312 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 GBP2P32456 591 aaPredicted RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 OR1D2P34982 312 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 RFC2P35250 354 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 TUFMP49411 452 aaKnown RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 SERPINB9P50453 376 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 PAPOLAP51003 745 aaKnown RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 NEK3P51956 506 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 KPNA1P52294 538 aaPredicted RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 NDST2P52849 883 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 SESN2P58004 480 aaPredicted RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 CRADDP78560 199 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 RING1Q06587 406 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 EFEMP1Q12805 493 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 IFT88Q13099 833 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 DNAJC3Q13217 504 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 MTA1Q13330 715 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 NAB1Q13506 487 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 PRPSAP1Q14558 356 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 PDK4Q16654 411 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 MGAT5BQ3V5L5 792 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 MS4A13Q5J8X5 152 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 SPANXN3Q5MJ09 141 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 C10orf120Q5SQS8 335 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 HHATQ5VTY9 493 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 LVRNQ6Q4G3 990 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 PRSS55Q6UWB4 352 aaPredicted RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 ARHGAP36Q6ZRI8 547 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 OTOP3Q7RTS5 596 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 TMEM135Q86UB9 458 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 TAX1BP1Q86VP1 789 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 CTAGE3PQ8IX95 158 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 CNPY4Q8N129 248 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 ATP6V0D2Q8N8Y2 350 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 CCDC197Q8NCU1 140 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 FBXO22Q8NEZ5 403 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 OR52K1Q8NGK4 314 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 TOP1MTQ969P6 601 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 GRAMD1AQ96CP6 724 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 ZNF689Q96CS4 500 aaPredicted RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 IGSF21Q96ID5 467 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 CABS1Q96KC9 395 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 BTN2A3PQ96KV6 586 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 FCRL3Q96P31 734 aaPredicted RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 TGS1Q96RS0 853 aaKnown RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 SEPT5Q99719 369 aaPredicted RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 CLSTN3Q9BQT9 956 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 TRIM56Q9BRZ2 755 aaKnown RBP6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 BEGAINQ9BUH8 593 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 PPP1R12CQ9BZL4 782 aa6.89□□□□□ -1.31
RN7SL561P-201ENST00000488553 ZYG11BQ9C0D3 744 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms