RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 PPARGC1AQ9UBK2 798 aaKnown RBP16.47■□□□□ 0.23
ERGIC3-216ENST00000488384 OR12D3Q9UGF7 316 aa16.47■□□□□ 0.23
ERGIC3-216ENST00000488384 SMG5Q9UPR3 1016 aaKnown RBP16.47■□□□□ 0.23
ERGIC3-216ENST00000488384 RPP40O75818 363 aaKnown RBP16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 LRIG2O94898 1065 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 MOCS3O95396 460 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 LMNAP02545 664 aaKnown RBP16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 CYP1A2P05177 515 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 HLA-EP13747 358 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 DESP17661 470 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 NDUFV2P19404 249 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 PLK1P53350 603 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 OXCT1P55809 520 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 SLC12A1Q13621 1099 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 STARD3Q14849 445 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 SLFN11Q7Z7L1 901 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 ZNF366Q8N895 744 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 PEBP4Q96S96 227 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 NUP85Q9BW27 656 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 PACSIN1Q9BY11 444 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 ZYG11BQ9C0D3 744 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 DEF6Q9H4E7 631 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 NHEJ1Q9H9Q4 299 aaPredicted RBP16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 BCCIPQ9P287 314 aaKnown RBP eCLIP16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 FZD10Q9ULW2 581 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 PLA2G4CQ9UP65 541 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 OR51B4Q9Y5P0 310 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 FRYLO94915 3013 aa16.46■□□□□ 0.23
ERGIC3-216ENST00000488384 PLXND1Q9Y4D7 1925 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 AKR1B10O60218 316 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 LRCH4O75427 683 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 EPHX1P07099 455 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 RHOCP08134 193 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 AIF1P55008 147 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 EFHC2Q5JST6 749 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 CYP4V2Q6ZWL3 525 aaPredicted RBP16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 SETD3Q86TU7 594 aaPredicted RBP16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 PYROXD2Q8N2H3 581 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 FEM1AQ9BSK4 669 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 SLC6A17Q9H1V8 727 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 SPTLC3Q9NUV7 552 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 ERVW-1Q9UQF0 538 aa16.45■□□□□ 0.22
ERGIC3-216ENST00000488384 NYNRINQ9P2P1 1898 aaKnown RBP16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 DCLK1O15075 740 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 SRPRAP08240 638 aaKnown RBP16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 L1CAMP32004 1257 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 STK19P49842 368 aaPredicted RBP16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 ECT2LQ008S8 904 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 SEMA3BQ13214 749 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 CAMK2GQ13555 558 aaPredicted RBP16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 SIM2Q14190 667 aaPredicted RBP16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 LPAL2Q16609 132 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 C6orf118Q5T5N4 469 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 DAB2IPQ5VWQ8 1189 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 RNF219Q5W0B1 726 aaPredicted RBP16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 PRR23BQ6ZRT6 265 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 NLRP14Q86W24 1093 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 TBC1D31Q96DN5 1066 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 MRGPRX1Q96LB2 322 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 CCDC42Q96M95 316 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 PSMB7Q99436 277 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 MKRN2Q9H000 416 aaKnown RBP16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 GPATCH2LQ9NWQ4 482 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 ANAPC7Q9UJX3 599 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 VPS28Q9UK41 221 aa16.44■□□□□ 0.22
ERGIC3-216ENST00000488384 A0A0D9SEW6 157 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 SYNCRIPO60506 623 aaKnown RBP16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 RNF8O76064 485 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 RHOQP17081 205 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 MIPP30301 263 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 OR1E1P30953 314 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 P2RY2P41231 377 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 COPAP53621 1224 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 SULT2A1Q06520 285 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 CA9Q16790 459 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 MAP7D1Q3KQU3 841 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 USP39Q53GS9 565 aaKnown RBP16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 RWDD4Q6NW29 188 aaKnown RBP16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 CEP68Q76N32 757 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 PGBD3Q8N328 593 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 NIPA2Q8N8Q9 360 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 KDM1BQ8NB78 822 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 ZNF564Q8TBZ8 553 aaPredicted RBP16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 RLN3Q8WXF3 142 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 CTNNBL1Q8WYA6 563 aaPredicted RBP16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 BTBD6Q96KE9 485 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 RPL10LQ96L21 214 aaKnown RBP16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 ANP32EQ9BTT0 268 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 SNRNP25Q9BV90 132 aaKnown RBP16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 MUC3BQ9H195 1237 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 MTG2Q9H4K7 406 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 PRSS16Q9NQE7 514 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 NDFIP2Q9NV92 336 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 TMEM248Q9NWD8 314 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 PCSK1NQ9UHG2 260 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 SLCO3A1Q9UIG8 710 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 AP4E1Q9UPM8 1137 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 INVSQ9Y283 1065 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 SPAG17Q6Q759 2223 aa16.43■□□□□ 0.22
ERGIC3-216ENST00000488384 CACNA1AO00555 2505 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms