RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 PLXND1Q9Y4D7 1925 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 A0A0A0MRY4 1105 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 GRID2IPA4D2P6 1211 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 BTNL10A8MVZ5 291 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 NRDCO43847 1150 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 MOCS3O95396 460 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 KRT1P04264 644 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 RHOQP17081 205 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 OR1E1P30953 314 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 ARHGAP25P42331 645 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 CTSOP43234 321 aaPredicted RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 TNFRSF4P43489 277 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 NAP1L1P55209 391 aaKnown RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 CDH6P55285 790 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 SATB1Q01826 763 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 KIF5AQ12840 1032 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 KRT81Q14533 505 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 EIF4HQ15056 248 aaKnown RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 HADHQ16836 314 aaKnown RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 PREPLQ4J6C6 727 aaPredicted RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 RNF219Q5W0B1 726 aaPredicted RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 RFX8Q6ZV50 586 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 KIAA0907Q7Z7F0 614 aaPredicted RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 PSTKQ8IV42 348 aaKnown RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 SYNPOQ8N3V7 929 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 RTL3Q8N8U3 475 aaKnown RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 IL17RCQ8NAC3 791 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 TXNDC5Q8NBS9 432 aaKnown RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 OR7D4Q8NG98 312 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 MUC3BQ9H195 1237 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 TMEM248Q9NWD8 314 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 ELOVL2Q9NXB9 296 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 CWC15Q9P013 229 aaKnown RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 KIAA1522Q9P206 1035 aaPredicted RBP11.35□□□□□ -0.59
UBE4B-210ENST00000488228 DNAI1Q9UI46 699 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 VPS28Q9UK41 221 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 TBC1D30Q9Y2I9 924 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 CAPN6Q9Y6Q1 641 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 SPAG17Q6Q759 2223 aa11.35□□□□□ -0.59
UBE4B-210ENST00000488228 A0A0D9SEW6 157 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 LRRD1A4D1F6 860 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 H3BRJ5 948 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 SGK1O00141 431 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 FGF10O15520 208 aaPredicted RBP11.34□□□□□ -0.59
UBE4B-210ENST00000488228 SNAP91O60641 907 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 ADAM23O75077 832 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 CCDC175P0C221 793 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 HNRNPLP14866 589 aaKnown RBP eCLIP11.34□□□□□ -0.59
UBE4B-210ENST00000488228 POLR2EP19388 210 aaKnown RBP11.34□□□□□ -0.59
UBE4B-210ENST00000488228 GLDCP23378 1020 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 PRKCHP24723 683 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 IL12RB1P42701 662 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 MAGEA9P43362 315 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 MAPKAPK2P49137 400 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 STK19P49842 368 aaPredicted RBP11.34□□□□□ -0.59
UBE4B-210ENST00000488228 CCDC173Q0VFZ6 552 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 MMRN1Q13201 1228 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 DPYSQ14117 519 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 PTPRNQ16849 979 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 FNDC3BQ53EP0 1204 aaKnown RBP11.34□□□□□ -0.59
UBE4B-210ENST00000488228 BOLA3Q53S33 107 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 ZFYVE27Q5T4F4 411 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 C6orf118Q5T5N4 469 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 NUDT18Q6ZVK8 323 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 DAAM2Q86T65 1068 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 CHPFQ8IZ52 775 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 TXLNBQ8N3L3 684 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 SPEM1Q8N4L4 309 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 NPWQ8N729 165 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 ZNF366Q8N895 744 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 LRRC57Q8N9N7 239 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 NETO2Q8NC67 525 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 TSC1Q92574 1164 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 ACDQ96AP0 544 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 ALG14Q96F25 216 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 CSPG4P5Q96PW8 444 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 HHIPQ96QV1 700 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 PSMB7Q99436 277 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 FEM1AQ9BSK4 669 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 CALN1Q9BXU9 219 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 NOL6Q9H6R4 1146 aaKnown RBP11.34□□□□□ -0.59
UBE4B-210ENST00000488228 MMP17Q9ULZ9 603 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 STARD13Q9Y3M8 1113 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 OR51B4Q9Y5P0 310 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 RAD54BQ9Y620 910 aa11.34□□□□□ -0.59
UBE4B-210ENST00000488228 CEP192Q8TEP8 1941 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 CHURC1-FNTBB4DL54 471 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 WASH3PC4AMC7 463 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 DAPK3O43293 454 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 PSTPIP1O43586 416 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 RAMP2O60895 175 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 KRT7P08729 469 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 DLDP09622 509 aaKnown RBP11.33□□□□□ -0.6
UBE4B-210ENST00000488228 HLA-EP13747 358 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 COL9A1P20849 921 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 AMPD1P23109 780 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 HTR7P34969 479 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 ACVRL1P37023 503 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 ARL4AP40617 200 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 SLC1A1P43005 524 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms