RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 DTWD2Q8NBA8 298 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 TPCN2Q8NHX9 752 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 KIAA1524Q8TCG1 905 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 ACDQ96AP0 544 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 ZNF830Q96NB3 372 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-219ENST00000488186 SPON2Q9BUD6 331 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 CHRDQ9H2X0 955 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 DNAI1Q9UI46 699 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 TBC1D30Q9Y2I9 924 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 KLF8O95600 359 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-219ENST00000488186 GOT1P17174 413 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 COL9A1P20849 921 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 NNMTP40261 264 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 TAS2R40P59535 323 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 SULT2A1Q06520 285 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 DPYSL2Q16555 572 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 FNDC3BQ53EP0 1204 aaKnown RBP16.16■□□□□ 0.18
C9orf3-219ENST00000488186 PITRM1Q5JRX3 1037 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 MANEALQ5VSG8 457 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 C11orf63Q6NUN7 778 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 Q6ZS52 159 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 RFX8Q6ZV50 586 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 CPNE8Q86YQ8 564 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 CHPFQ8IZ52 775 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 SYCE1Q8N0S2 351 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 SPEM1Q8N4L4 309 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 CCDC33Q8N5R6 958 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 USP33Q8TEY7 942 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 EZH1Q92800 747 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-219ENST00000488186 CALN1Q9BXU9 219 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 TMEM248Q9NWD8 314 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 DDX56Q9NY93 547 aaKnown RBP16.16■□□□□ 0.18
C9orf3-219ENST00000488186 HPCAL4Q9UM19 191 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 GUCA1BQ9UMX6 200 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 SLC8A2Q9UPR5 921 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.16■□□□□ 0.18
C9orf3-219ENST00000488186 STARD13Q9Y3M8 1113 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 HYOU1Q9Y4L1 999 aa16.16■□□□□ 0.18
C9orf3-219ENST00000488186 ILVBLA1L0T0 632 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 NPC1O15118 1278 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 ZBTB24O43167 697 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 LAMTOR5O43504 91 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 ASLP04424 464 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 MZF1P28698 734 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 NTSR1P30989 418 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 ETFBP38117 255 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 HCAR3P49019 387 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 NUMBP49757 651 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 ECT2LQ008S8 904 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 MTAPQ13126 283 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 SEMA3BQ13214 749 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 PDK2Q15119 407 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 PLEKHG6Q3KR16 790 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 HSF5Q4G112 596 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 ATP13A4Q4VNC1 1196 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 EOGTQ5NDL2 527 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 LRRC38Q5VT99 294 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 IL31Q6EBC2 164 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 TXNRD3NBQ6F5E7 133 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 CXorf57Q6NSI4 855 aaKnown RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 ZNF783Q6ZMS7 281 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 CYP4V2Q6ZWL3 525 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 POLNQ7Z5Q5 900 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 KIAA0907Q7Z7F0 614 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 ADIPOR2Q86V24 386 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 APCDD1Q8J025 514 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 RNF10Q8N5U6 811 aaKnown RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 ALLCQ8N6M5 410 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 RTL3Q8N8U3 475 aaKnown RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 TXNDC5Q8NBS9 432 aaKnown RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 CYB5D2Q8WUJ1 264 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 FEM1AQ9BSK4 669 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 C2orf49Q9BVC5 232 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 MAK16Q9BXY0 300 aaKnown RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 LZTFL1Q9NQ48 299 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 CWC15Q9P013 229 aaKnown RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 SALL4Q9UJQ4 1053 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 SLC25A13Q9UJS0 675 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 MYO18AQ92614 2054 aaKnown RBP16.15■□□□□ 0.18
C9orf3-219ENST00000488186 KIAA1549LQ6ZVL6 1849 aa16.15■□□□□ 0.18
C9orf3-219ENST00000488186 CHURC1-FNTBB4DL54 471 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 RAMP2O60895 175 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 PAPSS2O95340 614 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-219ENST00000488186 DLDP09622 509 aaKnown RBP16.14■□□□□ 0.17
C9orf3-219ENST00000488186 HNRNPLP14866 589 aaKnown RBP eCLIP16.14■□□□□ 0.17
C9orf3-219ENST00000488186 ERCC2P18074 760 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 HOXC13P31276 330 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 WASP42768 502 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 KIR2DL1P43626 348 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-219ENST00000488186 CXCL12P48061 93 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 CCR3P51677 355 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 PLK1P53350 603 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 PTPN5P54829 565 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 GNA12Q03113 381 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 POLD3Q15054 466 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-219ENST00000488186 FUT11Q495W5 492 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 EGFLAMQ63HQ2 1017 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 SERPINA13PQ6UXR4 307 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 NLRP14Q86W24 1093 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 C1orf210Q8IVY1 113 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms