RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 ADGRF3Q8IZF5 1079 aa3.62□□□□□ -1.83
SMC4-220ENST00000488017 CDH19Q9H159 772 aa3.62□□□□□ -1.83
SMC4-220ENST00000488017 KCNK9Q9NPC2 374 aa3.62□□□□□ -1.83
SMC4-220ENST00000488017 KIF26BQ2KJY2 2108 aa3.62□□□□□ -1.83
SMC4-220ENST00000488017 GXYLT2A0PJZ3 443 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 GOLIM4O00461 696 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 AREL1O15033 823 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 SOX30O94993 753 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 GNLYP22749 145 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 CHRNA5P30532 468 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 HNF4GQ14541 408 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 TTF1Q15361 905 aaPredicted RBP3.61□□□□□ -1.83
SMC4-220ENST00000488017 P3H1Q32P28 736 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 EXOC3L1Q86VI1 746 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 LILRB1Q8NHL6 650 aaPredicted RBP3.61□□□□□ -1.83
SMC4-220ENST00000488017 NPIPB3Q92617 1050 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 APOLD1Q96LR9 279 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 SORBS1Q9BX66 1292 aaKnown RBP3.61□□□□□ -1.83
SMC4-220ENST00000488017 CKAP5Q14008 2032 aa3.61□□□□□ -1.83
SMC4-220ENST00000488017 CLCA1A8K7I4 914 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 KIF3BO15066 747 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 LMX1BO60663 402 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 IGFBP2P18065 325 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 STAT1P42224 750 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 EFHC1Q5JVL4 640 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 STPG1Q5TH74 334 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 PLEKHA7Q6IQ23 1121 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 CXorf57Q6NSI4 855 aaKnown RBP3.6□□□□□ -1.83
SMC4-220ENST00000488017 AAGABQ6PD74 315 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 DARS2Q6PI48 645 aaKnown RBP3.6□□□□□ -1.83
SMC4-220ENST00000488017 ZNF771Q7L3S4 317 aaPredicted RBP3.6□□□□□ -1.83
SMC4-220ENST00000488017 IQCDQ96DY2 449 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 FAR2Q96K12 515 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 UNKQ9C0B0 810 aaKnown RBP3.6□□□□□ -1.83
SMC4-220ENST00000488017 EGLN1Q9GZT9 426 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 KLHL31Q9H511 634 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 OCIAD1Q9NX40 245 aa3.6□□□□□ -1.83
SMC4-220ENST00000488017 IGLV5-52A0A0A0MRZ9 124 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 TRBV5-7A0A0A0MS05 114 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 STMND1H3BQB6 276 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 NPC1O15118 1278 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 HRGP04196 525 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 ALDOCP09972 364 aaKnown RBP3.59□□□□□ -1.83
SMC4-220ENST00000488017 RAB27AP51159 221 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 SHC2P98077 582 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 FCN2Q15485 313 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 RRAGBQ5VZM2 374 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 TMEM88Q6PEY1 159 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 SMIM29Q86T20 159 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 CCDC28AQ8IWP9 274 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 NAGSQ8N159 534 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 GRAMD1AQ96CP6 724 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 ADAD1Q96M93 576 aaKnown RBP3.59□□□□□ -1.83
SMC4-220ENST00000488017 UHRF2Q96PU4 802 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 PAAF1Q9BRP4 392 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 BRINP2Q9C0B6 783 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 BTBD1Q9H0C5 482 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 ZNF304Q9HCX3 659 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 RAI2Q9Y5P3 530 aa3.59□□□□□ -1.83
SMC4-220ENST00000488017 A6NNZ2 444 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 F8W8V4 182 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 VIPP01282 170 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 NAGAP17050 411 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 ERVK11-1P61568 191 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 FAM193AP78312 1265 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 ARL16Q0P5N6 197 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 KIAA0408Q6ZU52 694 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 CCDC149Q6ZUS6 474 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 MDGA2Q7Z553 956 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 DPP10Q8N608 796 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 WDSUB1Q8N9V3 476 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 POC1AQ8NBT0 407 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 ADGRG7Q96K78 797 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 DUX3Q96PT4 197 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 MAGEB5Q9BZ81 275 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 PCDHAC2Q9Y5I4 1007 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 CADPSQ9ULU8 1353 aa3.58□□□□□ -1.84
SMC4-220ENST00000488017 ALDOAP04075 364 aaKnown RBP3.57□□□□□ -1.84
SMC4-220ENST00000488017 AMD1P17707 334 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 PEX2P28328 305 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 AVPR1AP37288 418 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 BNC1Q01954 994 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 SNTA1Q13424 505 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 SLC5A9Q2M3M2 681 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 MINDY4Q4G0A6 757 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 MSANTD2Q6P1R3 559 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 MYPOPQ86VE0 399 aaPredicted RBP3.57□□□□□ -1.84
SMC4-220ENST00000488017 FAM156AQ8NDB6 213 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 TMEM163Q8TC26 289 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 IP6K1Q92551 441 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 ZNF333Q96JL9 665 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 IL17FQ96PD4 163 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 PGLYRP2Q96PD5 576 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 SLC25A33Q9BSK2 321 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 GAREM1Q9H706 876 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 GAB2Q9UQC2 676 aa3.57□□□□□ -1.84
SMC4-220ENST00000488017 LINC01553A4QN01 128 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 C3orf70A6NLC5 250 aaPredicted RBP3.56□□□□□ -1.84
SMC4-220ENST00000488017 MCIDASD6RGH6 385 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 NKX2-8O15522 239 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms