RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	SLCO1B1	Q9Y6L6	691 aa		12.83	□□□□□ -0.36
SREBF1-215	ENST00000487401	EML5	Q05BV3	1969 aa		12.83	□□□□□ -0.36
SREBF1-215	ENST00000487401	ITIH6	Q6UXX5	1313 aa		12.83	□□□□□ -0.36
SREBF1-215	ENST00000487401	CEP295	Q9C0D2	2601 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	PAGE1	O75459	146 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	CLDN11	O75508	207 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	FTH1P19	P0C7X4	201 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	CYP11B1	P15538	503 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	GOT1	P17174	413 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	C5AR1	P21730	350 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	GRIA4	P48058	902 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	NUMB	P49757	651 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	PLK1	P53350	603 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	ELAVL3	Q14576	367 aa	Known RBP	12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	ACCSL	Q4AC99	568 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	MIIP	Q5JXC2	388 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	TAF3	Q5VWG9	929 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	NCEH1	Q6PIU2	408 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	DSG4	Q86SJ6	1040 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	ERICH1	Q86X53	443 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	KDF1	Q8NAX2	398 aa	Predicted RBP	12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	MSANTD4	Q8NCY6	345 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	OR2T34	Q8NGX1	318 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	OR14C36	Q8NHC7	312 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	RHBDD1	Q8TEB9	315 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	IGSF8	Q969P0	613 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	C18orf8	Q96DM3	657 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	CDC6	Q99741	560 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	FEM1A	Q9BSK4	669 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	ACE2	Q9BYF1	805 aa	Predicted RBP	12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	WDCP	Q9H6R7	721 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	TMEM51	Q9NW97	253 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	SERGEF	Q9UGK8	458 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	ADAMTS1	Q9UHI8	967 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	SLC25A13	Q9UJS0	675 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	VPS28	Q9UK41	221 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	FZD4	Q9ULV1	537 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	STAP1	Q9ULZ2	295 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	PAXBP1	Q9Y5B6	917 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	SPAG17	Q6Q759	2223 aa		12.82	□□□□□ -0.36
SREBF1-215	ENST00000487401	THADA	Q6YHU6	1953 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401		A0A1W2PPC4	97 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	KCNK3	O14649	394 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	FLRT2	O43155	660 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	CBFA2T3	O75081	653 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	F9	P00740	461 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	IGHV4-34	P06331	123 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	TPM2	P07951	284 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	ZNF18	P17022	549 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	ANP32A	P39687	249 aa	Known RBP	12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	SULT1E1	P49888	294 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	CCR5	P51681	352 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	CDH4	P55283	916 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	RACK1	P63244	317 aa	Known RBP	12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	CENPC	Q03188	943 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	DEUP1	Q05D60	604 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	KCNMA1	Q12791	1236 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	TCP11X2	Q5H9J9	407 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	BRMS1L	Q5PSV4	323 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	FAM46C	Q5VWP2	391 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	CXorf57	Q6NSI4	855 aa	Known RBP	12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	LRRC31	Q6UY01	552 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	RAB44	Q7Z6P3	723 aa	Predicted RBP	12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	C14orf80	Q86SX3	495 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	PNPLA1	Q8N8W4	532 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	OR8D1	Q8WZ84	308 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	GATA6	Q92908	595 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	PTPRN2	Q92932	1015 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	SPAG5	Q96R06	1193 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	STK33	Q9BYT3	514 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	TKTL2	Q9H0I9	626 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	MUC3B	Q9H195	1237 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	AASDHPPT	Q9NRN7	309 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	SAMSN1	Q9NSI8	373 aa	Known RBP	12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	ZMIZ1	Q9ULJ6	1067 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	TPX2	Q9ULW0	747 aa	Known RBP	12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	FHOD1	Q9Y613	1164 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	RALGAPA1	Q6GYQ0	2036 aa		12.81	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBC1D3D	A0A087WVF3	549 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBC1D3I	A0A087WXS9	549 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBC1D3E	A0A087X179	549 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBC1D3K	A0A087X1G2	549 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBC1D3F	A6NER0	549 aa	Predicted RBP	12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBC1D3L	B9A6J9	549 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	VILL	O15195	856 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	DFNA5	O60443	496 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	ADCY5	O95622	1261 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	LSM8	O95777	96 aa	Known RBP	12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBC1D3H	P0C7X1	549 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	UCHL3	P15374	230 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	VAV1	P15498	845 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	EEF1G	P26641	437 aa	Known RBP	12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	GGCX	P38435	758 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	CTSK	P43235	329 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	GABRB2	P47870	512 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	CXCR3	P49682	368 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	VASP	P50552	380 aa	Predicted RBP	12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	CCT8	P50990	548 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	KRT83	P78385	493 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms