RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TUBB3Q13509 450 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 UPP1Q16831 310 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 PPP1R14CQ8TAE6 165 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 LPPQ93052 612 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 KCNK16Q96T55 309 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 EPAS1Q99814 870 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 ACBD6Q9BR61 282 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 NMRK1Q9NWW6 199 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 KLHL8Q9P2G9 620 aaPredicted RBP26.72■■□□□ 1.87
HLA-C-208ENST00000487245 TRHDEQ9UKU6 1024 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 TIMM13Q9Y5L4 95 aaPredicted RBP26.72■■□□□ 1.87
HLA-C-208ENST00000487245 SCN10AQ9Y5Y9 1956 aa26.72■■□□□ 1.87
HLA-C-208ENST00000487245 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.71■■□□□ 1.87
HLA-C-208ENST00000487245 PROCP04070 461 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 POLBP06746 335 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 GARSP41250 739 aaKnown RBP26.71■■□□□ 1.87
HLA-C-208ENST00000487245 CXCR3P49682 368 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 ZRSR2Q15696 482 aaKnown RBP26.71■■□□□ 1.87
HLA-C-208ENST00000487245 TRMT5Q32P41 509 aaKnown RBP26.71■■□□□ 1.87
HLA-C-208ENST00000487245 GRTP1Q5TC63 336 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 SNX30Q5VWJ9 437 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 MFSD14CQ5VZR4 134 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 ANO7Q6IWH7 933 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 CXCL17Q6UXB2 119 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 GPRIN1Q7Z2K8 1008 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 ZNF778Q96MU6 729 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 CPNE1Q99829 537 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 COLEC11Q9BWP8 271 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 SYBUQ9NX95 663 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 CACNG4Q9UBN1 327 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 DSEQ9UL01 958 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 ZNF638Q14966 1978 aaKnown RBP26.71■■□□□ 1.87
HLA-C-208ENST00000487245 SRCAPQ6ZRS2 3230 aa26.71■■□□□ 1.87
HLA-C-208ENST00000487245 FAM72CH0Y354 149 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 PRKCGP05129 697 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 ALOX15P16050 662 aaPredicted RBP26.7■■□□□ 1.87
HLA-C-208ENST00000487245 PTPN3P26045 913 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 SERPINB6P35237 376 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 GP5P40197 560 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 SLC1A6P48664 564 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 NKX3-2P78367 333 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 MRPS35P82673 323 aaKnown RBP26.7■■□□□ 1.87
HLA-C-208ENST00000487245 PCLAFQ15004 111 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 MUM1Q2TAK8 710 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 FAM72AQ5TYM5 149 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 FAM72DQ6L9T8 149 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 FAM72BQ86X60 149 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 SCUBE1Q8IWY4 988 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 C3orf58Q8NDZ4 430 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 VAT1Q99536 393 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 WDCPQ9H6R7 721 aa26.7■■□□□ 1.87
HLA-C-208ENST00000487245 MARCOQ9UEW3 520 aaPredicted RBP26.7■■□□□ 1.87
HLA-C-208ENST00000487245 TOP3BO95985 862 aaKnown RBP26.7■■□□□ 1.86
HLA-C-208ENST00000487245 CYP11A1P05108 521 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 CTSHP09668 335 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 KITP10721 976 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 MYL4P12829 197 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 CRADDP78560 199 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 TIGD5Q53EQ6 642 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 RABGAP1LQ5R372 815 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 PM20D1Q6GTS8 502 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 FAM171BQ6P995 826 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 LRRC74BQ6ZQY2 392 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 ZCCHC23Q6ZST2 131 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 HDAC11Q96DB2 347 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 DNAJC28Q9NX36 388 aa26.7■■□□□ 1.86
HLA-C-208ENST00000487245 F5H423 210 aaPredicted RBP26.69■■□□□ 1.86
HLA-C-208ENST00000487245 TBX10O75333 385 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 KLHL2O95198 593 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 AP2A1O95782 977 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 CYBAP13498 195 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 AFF1P51825 1210 aaKnown RBP26.69■■□□□ 1.86
HLA-C-208ENST00000487245 RPL10AP62906 217 aaKnown RBP26.69■■□□□ 1.86
HLA-C-208ENST00000487245 ITPRIPL1Q6GPH6 555 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 C16orf46Q6P387 395 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 BEND5Q7L4P6 421 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 RASSF3Q86WH2 238 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 APLFQ8IW19 511 aaPredicted RBP26.69■■□□□ 1.86
HLA-C-208ENST00000487245 ADAM32Q8TC27 787 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 NRG4Q8WWG1 115 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 CERS2Q96G23 380 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 RILPQ96NA2 401 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 LRRC40Q9H9A6 602 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 ZFATQ9P243 1243 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 DNAJB4Q9UDY4 337 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 DNAJC16Q9Y2G8 782 aa26.69■■□□□ 1.86
HLA-C-208ENST00000487245 CASTOR2A6NHX0 329 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 CPA2P48052 419 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 GALNT2Q10471 571 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 C6orf163Q5TEZ5 329 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 RGMBQ6NW40 437 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 BHLHA9Q7RTU4 235 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 OR6Y1Q8NGX8 325 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 MYLPFQ96A32 169 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 FAM161BQ96MY7 647 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 EBF4Q9BQW3 602 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 OSBPL1AQ9BXW6 950 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 BFARQ9NZS9 450 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 SLC17A6Q9P2U8 582 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 PSAT1Q9Y617 370 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms