RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 PFKFB2O60825 505 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 CST3P01034 146 aaPredicted RBP12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 KRT18P05783 430 aaKnown RBP12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 PRKAR1AP10644 381 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 LIFP15018 202 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 NOS2P35228 1153 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 DRD3P35462 400 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 RPIAP49247 311 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 TNNC1P63316 161 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 WDR72Q3MJ13 1102 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 KMT5BQ4FZB7 885 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 NUGGCQ68CJ6 796 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 TMPRSS9Q7Z410 1059 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 TADA2BQ86TJ2 420 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 GPBP1Q86WP2 473 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 TRIM69Q86WT6 500 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 SLC22A18ASQ8N1D0 253 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 WFDC5Q8TCV5 224 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 TMA16Q96EY4 203 aaKnown RBP12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 PCIF1Q9H4Z3 704 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 PDRG1Q9NUG6 133 aa12.64□□□□□ -0.39
ATPAF1-205ENST00000487193 CSMD2Q7Z408 3487 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 AQP9O43315 295 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 CNTN5O94779 1100 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 LDHAP00338 332 aaKnown RBP12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 RALAP11233 206 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 CCDC130P13994 396 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 ATP1A2P50993 1020 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 CCL7P80098 99 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 DEFB109BQ30KR1 87 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 OR6B2Q6IFH4 312 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 Q6ZSR6 202 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 SLC35F3Q8IY50 421 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 FUKQ8N0W3 1084 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 SLC34A3Q8N130 599 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 IL22RA1Q8N6P7 574 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 TMEM145Q8NBT3 493 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 NANOS1Q8WY41 292 aaKnown RBP12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 GLMNQ92990 594 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 NKD1Q969G9 470 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 CDK5RAP3Q96JB5 506 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 UNKQ9C0B0 810 aaKnown RBP12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 PADI4Q9UM07 663 aa12.63□□□□□ -0.39
ATPAF1-205ENST00000487193 APCP25054 2843 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 EDDM13A0A1B0GTR0 161 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 TARSL2A2RTX5 802 aaKnown RBP12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 ZNF891A8MT65 544 aaPredicted RBP12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 PLRG1O43660 514 aaKnown RBP12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 RNGTTO60942 597 aaKnown RBP12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 ABCD1P33897 745 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 DDIT3P35638 169 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 SGSHP51688 502 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 ZNF131P52739 623 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 KCNA1Q09470 495 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 FGL2Q14314 439 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 DUOXA2Q1HG44 320 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 SCD5Q86SK9 330 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 NECAB1Q8N987 351 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 APOBEC4Q8WW27 367 aaKnown RBP12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 PTPRN2Q92932 1015 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 NAT6Q93015 286 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 IFT43Q96FT9 208 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 TCTN2Q96GX1 697 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 MRGPRX3Q96LB0 322 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 TMEM74Q96NL1 305 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 CGRRF1Q99675 332 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 CSNK1G3Q9Y6M4 447 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 SVILO95425 2214 aa12.62□□□□□ -0.39
ATPAF1-205ENST00000487193 NAV3Q8IVL0 2385 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 D6RAR5 112 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 H3BM21 787 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 STMND1H3BQB6 276 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 HNRNPRO43390 633 aaKnown RBP12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 DUX1O43812 170 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 LDLRP01130 860 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 CSF2P04141 144 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 RPLP0P05388 317 aaKnown RBP12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 FAM163BP0C2L3 166 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 CD82P27701 267 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 MZF1P28698 734 aaPredicted RBP12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 AKT2P31751 481 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 CSKP41240 450 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 CTSOP43234 321 aaPredicted RBP12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 MRPL49Q13405 166 aaKnown RBP12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 SEPT6Q14141 434 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 HYIQ5T013 277 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 DTHD1Q6ZMT9 781 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 TIPARPQ7Z3E1 657 aaKnown RBP12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 PTAR1Q7Z6K3 402 aaPredicted RBP12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 ACOT1Q86TX2 421 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 FAM217AQ8IXS0 508 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 MMP21Q8N119 569 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 SLC2A14Q8TDB8 520 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 TTC17Q96AE7 1141 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 BOCQ9BWV1 1114 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 GULP1Q9UBP9 304 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 SLCO3A1Q9UIG8 710 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms