RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 ZCCHC7Q8N3Z6 543 aaKnown RBP6.37□□□□□ -1.39
VPS13D-209ENST00000487188 GRAPLQ8TC17 118 aaPredicted RBP6.37□□□□□ -1.39
VPS13D-209ENST00000487188 TRUB1Q8WWH5 349 aaKnown RBP6.37□□□□□ -1.39
VPS13D-209ENST00000487188 DCPSQ96C86 337 aaKnown RBP6.37□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF597Q96LX8 424 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 RIT2Q99578 217 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 EBNA1BP2Q99848 306 aaKnown RBP6.37□□□□□ -1.39
VPS13D-209ENST00000487188 ADPGKQ9BRR6 497 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 PCDHAC1Q9H158 963 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 VPS33BQ9H267 617 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 ADNPQ9H2P0 1102 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 SMARCAD1Q9H4L7 1026 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 ZFYVE28Q9HCC9 887 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 CNGB3Q9NQW8 809 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 TMEM216Q9P0N5 145 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 SLC17A6Q9P2U8 582 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 TLK1Q9UKI8 766 aa6.37□□□□□ -1.39
VPS13D-209ENST00000487188 WDR27A2RRH5 827 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 TMX2-CTNND1H3BSU7 103 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PHGDHO43175 533 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 MAN1A2O60476 641 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SNAP91O60641 907 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 HSPA1AP0DMV8 641 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 HSPA1BP0DMV9 641 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SLURP2P0DP57 97 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 MYCLP12524 364 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 NOVP48745 357 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 TRPC1P48995 793 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 STX5Q13190 355 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 DGKDQ16760 1214 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PPM1JQ5JR12 505 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 TMC5Q6UXY8 1006 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 MAVSQ7Z434 540 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 ZC3H7AQ8IWR0 971 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 EXOC8Q8IYI6 725 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 OFCC1Q8IZS5 231 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SIX5Q8N196 739 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 CBR4Q8N4T8 237 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 LPGAT1Q92604 370 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 MFSD14AQ96MC6 490 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 ADI1Q9BV57 179 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SLC2A11Q9BYW1 496 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 UNKQ9C0B0 810 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 VTA1Q9NP79 307 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 NGRNQ9NPE2 291 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 DDX4Q9NQI0 724 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 NYAP2Q9P242 653 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SRP68Q9UHB9 627 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 AGO2Q9UKV8 859 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 CNOT6Q9ULM6 557 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 CARD8Q9Y2G2 431 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PCDHA11Q9Y5I1 949 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 CLDN25C9JDP6 229 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 H0YJX3 145 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PSMD11O00231 422 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 HDAC3O15379 428 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 EXTL3O43909 919 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 LRCH4O75427 683 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PIGNO95427 931 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 CHEK2O96017 543 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 TCEA1P23193 301 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 KRT76Q01546 638 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 GABPAQ06546 454 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF252P-AS1Q0IIN9 211 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 NOMO1Q15155 1222 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 LSM12Q3MHD2 195 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 FAM102AQ5T9C2 384 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 TDRD10Q5VZ19 366 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 EPGNQ6UW88 154 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SMIM5Q71RC9 77 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 ADCK1Q86TW2 530 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 DHFR2Q86XF0 187 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PDPRQ8NCN5 879 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 CRYGNQ8WXF5 182 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 MSTO1Q9BUK6 570 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 STRA6Q9BX79 667 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 CEP44Q9C0F1 390 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PRDM16Q9HAZ2 1276 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SEPT10Q9P0V9 454 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PI4KBQ9UBF8 816 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PTBP2Q9UKA9 531 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PRR12Q9ULL5 1215 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 USP18Q9UMW8 372 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 DGKBQ9Y6T7 804 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SLC15A5A6NIM6 579 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 TMEM114B3SHH9 223 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 H2AFYO75367 372 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 MYO1DO94832 1006 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF26P17031 533 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 MIPP30301 263 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 GRIA3P42263 894 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 STX1BP61266 288 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PMS2P3Q13401 168 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 KCNJ8Q15842 424 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PGS1Q32NB8 556 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF362Q5T0B9 420 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 TMEM198Q66K66 360 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 GK5Q6ZS86 529 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 CMC1Q7Z7K0 106 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 DHRSXQ8N5I4 330 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms