RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ZNF484Q5JVG2 852 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 TMEM88Q6PEY1 159 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 TMEM65Q6PI78 240 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 KYAT3Q6YP21 454 aaKnown RBP3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 DCDC5Q6ZRR9 648 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 USP43Q70EL4 1123 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 LAS2Q8IYD9 372 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 ESX1Q8N693 406 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 ZBTB8BQ8NAP8 495 aaPredicted RBP3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 SRFBP1Q8NEF9 429 aaKnown RBP3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 HIC2Q96JB3 615 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 MPP4Q96JB8 637 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 ASB2Q96Q27 587 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 FYTTD1Q96QD9 318 aaKnown RBP3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 NPAS1Q99742 590 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 REEP2Q9BRK0 252 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 PLEKHA2Q9HB19 425 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 PDE11AQ9HCR9 933 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 TMEM160Q9NX00 188 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 RCE1Q9Y256 329 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 COPG1Q9Y678 874 aaKnown RBP3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 WDR17Q8IZU2 1322 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 CCDC196A0A1B0GTZ2 297 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 BTBD19C9JJ37 291 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 CHN1P15882 459 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 ATF7P17544 494 aaPredicted RBP3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 NDUFS1P28331 727 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 DDIT3P35638 169 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 PNPLA4P41247 253 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 AGTR2P50052 363 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 LARS2Q15031 903 aaKnown RBP3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 DLGAP5Q15398 846 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 SLC4A8Q2Y0W8 1093 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 KRTAP27-1Q3LI81 207 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 LRRC24Q50LG9 513 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 VSTM1Q6UX27 236 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 SERPINA13PQ6UXR4 307 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 SLC39A5Q6ZMH5 540 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 ADPRHL1Q8NDY3 354 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 PRSS3P2Q8NHM4 247 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 ADAMTS18Q8TE60 1221 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 CLEC4CQ8WTT0 213 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 ARRDC3Q96B67 414 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 RITA1Q96K30 269 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 CCDC17Q96LX7 622 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 SEC62Q99442 399 aaKnown RBP3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 HTATIP2Q9BUP3 242 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 ARHGAP39Q9C0H5 1083 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 RMI1Q9H9A7 625 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 UBN1Q9NPG3 1134 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 B3GNT3Q9Y2A9 372 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 TMEM98Q9Y2Y6 226 aa3.93□□□□□ -1.78
SNRNP27-204ENST00000487029 LY6G6EA0A0G2JKS1 128 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 TCRBV5S1A1TA0A578 114 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 VWA3AA6NCI4 1184 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 J3KRW8 73 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 GRM8O00222 908 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 PRYO14603 147 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 EPB41L2O43491 1005 aaKnown RBP3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 GCATO75600 419 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 KAT7O95251 611 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 CSF1P09603 554 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 TNNT1P13805 278 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 ATP5F1P24539 256 aaPredicted RBP3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 HOXD12P35452 270 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 STAT6P42226 847 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 VPS41P49754 854 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 G3BP1Q13283 466 aaKnown RBP eCLIP3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 GAB1Q13480 694 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 CBWD5Q5RIA9 395 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 ATG16L1Q676U5 607 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 SHC4Q6S5L8 630 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 KIAA1324Q6UXG2 1013 aaKnown RBP3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 ANKRD44Q8N8A2 993 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 LINS1Q8NG48 757 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 HTRA1Q92743 480 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 COQ8BQ96D53 544 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 RBM17Q96I25 401 aaKnown RBP3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 ZNF845Q96IR2 970 aaPredicted RBP3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 GPR63Q9BZJ6 419 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 UNC45AQ9H3U1 944 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 PRDM16Q9HAZ2 1276 aa3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 SIRT4Q9Y6E7 314 aaPredicted RBP3.92□□□□□ -1.78
SNRNP27-204ENST00000487029 A6NLC8 198 aa3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 POC1B-GALNT4F8VUJ3 575 aa3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 UBE2Q2LH0YL09 131 aa3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 GTPBP1O00178 669 aaKnown RBP3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 KLK10O43240 276 aa3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 FGBP02675 491 aa3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 ACP5P13686 325 aa3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 PRF1P14222 555 aa3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 CPA1P15085 419 aa3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 LIFRP42702 1097 aa3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 SLC37A1P57057 533 aa3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 CDK18Q07002 472 aa3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.91□□□□□ -1.78
SNRNP27-204ENST00000487029 DDX10Q13206 875 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms