RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	FNIP1	Q8TF40	1166 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	FAM172A	Q8WUF8	416 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	CALR3	Q96L12	384 aa	Known RBP	13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	NPY6R	Q99463	290 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	TMEM74B	Q9NUR3	256 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	MARCH2	Q9P0N8	246 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	LCMT1	Q9UIC8	334 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	MBD1	Q9UIS9	605 aa	Predicted RBP	13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	ZNF510	Q9Y2H8	683 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	ATXN2	Q99700	1313 aa	Known RBP	13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	SLC12A8	A0AV02	714 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	GFRA2	O00451	464 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	KHNYN	O15037	678 aa	Known RBP	13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	MSI1	O43347	362 aa	Known RBP	13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	CACNG3	O60359	315 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	TULP3	O75386	442 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	PALM	O75781	387 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	RNF8	O76064	485 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	KAT7	O95251	611 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	HMBS	P08397	361 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	PTGER3	P43115	390 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	TNFRSF4	P43489	277 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	RAB6C	Q53S08	254 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	OTUD1	Q5VV17	481 aa	Predicted RBP	13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	SCYL2	Q6P3W7	929 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	C11orf74	Q86VG3	221 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	CPNE8	Q86YQ8	564 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	DEFB124	Q8NES8	71 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	KCNV2	Q8TDN2	545 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	RNF34	Q969K3	372 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	NT5C3B	Q969T7	300 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	SERPINB11	Q96P15	392 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	XPO6	Q96QU8	1125 aa	Known RBP	13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	ADAM33	Q9BZ11	813 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	DCLK3	Q9C098	648 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	RAB6C	Q9H0N0	254 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	GOLPH3	Q9H4A6	298 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	ARHGEF4	Q9NR80	690 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	DEC1	Q9P2X7	70 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	WASF3	Q9UPY6	502 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	HYOU1	Q9Y4L1	999 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	CAPN6	Q9Y6Q1	641 aa		13.51	□□□□□ -0.25
NR1H3-223	ENST00000486991	GRID2IP	A4D2P6	1211 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	IRAK2	O43187	625 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	KIF5C	O60282	957 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	ADAM23	O75077	832 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	ALDH1A2	O94788	518 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	F9	P00740	461 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	PENK	P01210	267 aa	Predicted RBP	13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	PROS1	P07225	676 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	RDX	P35241	583 aa	Known RBP	13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	P2RY2	P41231	377 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	WAS	P42768	502 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	MAPK8	P45983	427 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	TBX4	P57082	545 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	TRIP4	Q15650	581 aa	Predicted RBP	13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	ANO4	Q32M45	955 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	EOGT	Q5NDL2	527 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	DAB2IP	Q5VWQ8	1189 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	C11orf63	Q6NUN7	778 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	STRADA	Q7RTN6	431 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	TRMT11	Q7Z4G4	463 aa	Known RBP	13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	FAM217A	Q8IXS0	508 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	NIPA2	Q8N8Q9	360 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	HMGB4	Q8WW32	186 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	CENPI	Q92674	756 aa	Predicted RBP	13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	ALS2CR12	Q96Q35	445 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	IRX2	Q9BZI1	471 aa	Predicted RBP	13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	TMEM9B	Q9NQ34	198 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	KCND1	Q9NSA2	647 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	PIGV	Q9NUD9	493 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	CALCOCO1	Q9P1Z2	691 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	ALG6	Q9Y672	507 aa		13.5	□□□□□ -0.25
NR1H3-223	ENST00000486991	TBC1D3B	A6NDS4	549 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	ZBTB24	O43167	697 aa	Predicted RBP	13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	MAP3K13	O43283	966 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	SPOP	O43791	374 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	LRCH4	O75427	683 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	ENDOD1	O94919	500 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	IGLV3-25	P01717	112 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	IGLV3-27	P01718	113 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	TNNT1	P13805	278 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	TYR	P14679	529 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	COMT	P21964	271 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	CORO1A	P31146	461 aa	Known RBP	13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	MAN1A1	P33908	653 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	CHKA	P35790	457 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	GJC1	P36383	396 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	HDAC4	P56524	1084 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	ACAP1	Q15027	740 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	E2F5	Q15329	346 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	ZNF569	Q5MCW4	686 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	FYB2	Q5VWT5	728 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	KIAA1211L	Q6NV74	962 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	ZSCAN30	Q86W11	494 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	FAM131B	Q86XD5	332 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	SYCE1	Q8N0S2	351 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	PGBD3	Q8N328	593 aa		13.49	□□□□□ -0.25
NR1H3-223	ENST00000486991	TERB1	Q8NA31	727 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms