RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ZNF180Q9UJW8 692 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 AAR2Q9Y312 384 aaKnown RBP11.92□□□□□ -0.5
PRKCB-207ENST00000486868 SNX10Q9Y5X0 201 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.92□□□□□ -0.5
PRKCB-207ENST00000486868 MAGEB16A2A368 324 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 ARHGAP42A6NI28 874 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 ACSL4O60488 711 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 MAFKO60675 156 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 FGF18O76093 207 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 ALDH1A2O94788 518 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 OAS1P00973 400 aaKnown RBP11.91□□□□□ -0.5
PRKCB-207ENST00000486868 ACRP10323 421 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 RPL17P18621 184 aaKnown RBP11.91□□□□□ -0.5
PRKCB-207ENST00000486868 GCAP28676 217 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 SLC11A2P49281 568 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 HARS2P49590 506 aaKnown RBP11.91□□□□□ -0.5
PRKCB-207ENST00000486868 IRAK1P51617 712 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 UBE3AQ05086 875 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 GAD2Q05329 585 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 NAB1Q13506 487 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 HNRNPDQ14103 355 aaKnown RBP11.91□□□□□ -0.5
PRKCB-207ENST00000486868 TAF12Q16514 161 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 PARP15Q460N3 678 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 TMEM240Q5SV17 173 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 FBXL22Q6P050 247 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 CCDC149Q6ZUS6 474 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 LINC00523Q86TU6 105 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 EXOC3L1Q86VI1 746 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 UHMK1Q8TAS1 419 aaKnown RBP11.91□□□□□ -0.5
PRKCB-207ENST00000486868 GPR152Q8TDT2 470 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 ZNF512Q96ME7 567 aaPredicted RBP11.91□□□□□ -0.5
PRKCB-207ENST00000486868 SLC39A8Q9C0K1 460 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 MTIF3Q9H2K0 278 aaKnown RBP11.91□□□□□ -0.5
PRKCB-207ENST00000486868 CCDC134Q9H6E4 229 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 LRRC40Q9H9A6 602 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 CASS4Q9NQ75 786 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 ZNF212Q9UDV6 495 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 ZC3H7BQ9UGR2 993 aaKnown RBP11.91□□□□□ -0.5
PRKCB-207ENST00000486868 STOML2Q9UJZ1 356 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 NUDT5Q9UKK9 219 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 INSL5Q9Y5Q6 135 aa11.91□□□□□ -0.5
PRKCB-207ENST00000486868 C2CD2LO14523 706 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 TEX28O15482 410 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 ZBTB24O43167 697 aaPredicted RBP11.9□□□□□ -0.5
PRKCB-207ENST00000486868 ANXA9O76027 345 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 OLFM2O95897 454 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 TBX18O95935 607 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 MOCS2O96007 188 aaPredicted RBP11.9□□□□□ -0.5
PRKCB-207ENST00000486868 CCNB1P14635 433 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 TACR2P21452 398 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 PSMB4P28070 264 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 SSTR1P30872 391 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 CD68P34810 354 aaPredicted RBP11.9□□□□□ -0.5
PRKCB-207ENST00000486868 SLCO1A2P46721 670 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 NPY2RP49146 381 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 FAXCQ5TGI0 409 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 TMCO4Q5TGY1 634 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 NAPEPLDQ6IQ20 393 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 LILRA6Q6PI73 481 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 OTOP2Q7RTS6 562 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 DNAJB7Q7Z6W7 309 aaPredicted RBP11.9□□□□□ -0.5
PRKCB-207ENST00000486868 TRABD2AQ86V40 505 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 ANKMY2Q8IV38 441 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 IGDCC3Q8IVU1 814 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 TP53INP2Q8IXH6 220 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
PRKCB-207ENST00000486868 GSDMBQ8TAX9 411 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 FBF1Q8TES7 1133 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 SLC44A1Q8WWI5 657 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 TTC17Q96AE7 1141 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 ALKBH8Q96BT7 664 aaKnown RBP11.9□□□□□ -0.5
PRKCB-207ENST00000486868 ZNF599Q96NL3 588 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 CCSER2Q9H7U1 834 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 RSPH14Q9UHP6 348 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 MAGED2Q9UNF1 606 aaPredicted RBP11.9□□□□□ -0.5
PRKCB-207ENST00000486868 CHMP2BQ9UQN3 213 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 PCDHA11Q9Y5I1 949 aa11.9□□□□□ -0.5
PRKCB-207ENST00000486868 TCRBV9S1A1TA0A576 114 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 SOBPA7XYQ1 873 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 F5H5T6 163 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 KCNK1O00180 336 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 PRRG1O14668 218 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 PRPF4O43172 522 aaKnown RBP eCLIP11.89□□□□□ -0.51
PRKCB-207ENST00000486868 COCHO43405 550 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 CPP00450 1065 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 JCHAINP01591 159 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 C1QAP02745 245 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 F11P03951 625 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 ADH1AP07327 375 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 PGAM1P18669 254 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 HPDP32754 393 aaPredicted RBP11.89□□□□□ -0.51
PRKCB-207ENST00000486868 BMPR1AP36894 532 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 MSH2P43246 934 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 RENBPP51606 427 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 GEMP55040 296 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 CDH4P55283 916 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 GNGT1P63211 74 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 TWF1Q12792 350 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 ZBTB17Q13105 803 aa11.89□□□□□ -0.51
PRKCB-207ENST00000486868 SLC14A2Q15849 920 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms