RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 PPM1KQ8N3J5 372 aa20.71■□□□□ 0.91
PHF1-208ENST00000486845 MFSD2AQ8NA29 543 aa20.71■□□□□ 0.91
PHF1-208ENST00000486845 ADAM32Q8TC27 787 aa20.71■□□□□ 0.91
PHF1-208ENST00000486845 PTPRN2Q92932 1015 aa20.71■□□□□ 0.91
PHF1-208ENST00000486845 RPL10LQ96L21 214 aaKnown RBP20.71■□□□□ 0.91
PHF1-208ENST00000486845 PRORYQ9H606 182 aa20.71■□□□□ 0.91
PHF1-208ENST00000486845 METTL14Q9HCE5 456 aaKnown RBP20.71■□□□□ 0.91
PHF1-208ENST00000486845 TJP2Q9UDY2 1190 aa20.71■□□□□ 0.91
PHF1-208ENST00000486845 SHROOM3Q8TF72 1996 aa20.71■□□□□ 0.91
PHF1-208ENST00000486845 BPTFQ12830 3046 aa20.71■□□□□ 0.91
PHF1-208ENST00000486845 TBC1D3DA0A087WVF3 549 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 TBC1D3IA0A087WXS9 549 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 TBC1D3EA0A087X179 549 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 TBC1D3KA0A087X1G2 549 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 TBC1D3FA6NER0 549 aaPredicted RBP20.7■□□□□ 0.9
PHF1-208ENST00000486845 TBC1D3LB9A6J9 549 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 RNF225M0QZC1 329 aaPredicted RBP20.7■□□□□ 0.9
PHF1-208ENST00000486845 PMM2O15305 246 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 MAGEC1O60732 1142 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 TBC1D3HP0C7X1 549 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 NUDT1P36639 197 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 PMS1P54277 932 aaKnown RBP20.7■□□□□ 0.9
PHF1-208ENST00000486845 PPP2CBP62714 309 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 PPP2CAP67775 309 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 NUCB2P80303 420 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 PNOCQ13519 176 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 SLC12A1Q13621 1099 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 TBC1D3GQ6DHY5 549 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 TBC1D3CQ6IPX1 549 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 BEND5Q7L4P6 421 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 PRPF39Q86UA1 669 aaKnown RBP20.7■□□□□ 0.9
PHF1-208ENST00000486845 TAC4Q86UU9 113 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 IQCHQ86VS3 1027 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 CHSY1Q86X52 802 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 TBC1D3Q8IZP1 549 aaPredicted RBP20.7■□□□□ 0.9
PHF1-208ENST00000486845 APCDD1Q8J025 514 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 KDM4CQ9H3R0 1056 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 NAALADL1Q9UQQ1 740 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 ZDHHC9Q9Y397 364 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 ATP6V1DQ9Y5K8 247 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 PTPRQQ9UMZ3 2332 aa20.7■□□□□ 0.9
PHF1-208ENST00000486845 MYLKQ15746 1914 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 ATXN7O15265 892 aaPredicted RBP20.69■□□□□ 0.9
PHF1-208ENST00000486845 SLC7A4O43246 635 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 CKMT2P17540 419 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 TACR2P21452 398 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 ACADSBP45954 432 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 STK19P49842 368 aaPredicted RBP20.69■□□□□ 0.9
PHF1-208ENST00000486845 SULT2A1Q06520 285 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 BNIP3Q12983 259 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 RAP1GAP2Q684P5 730 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.69■□□□□ 0.9
PHF1-208ENST00000486845 DSG4Q86SJ6 1040 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 CACTIN-AS1Q8N1I8 211 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 SNIP1Q8TAD8 396 aaKnown RBP20.69■□□□□ 0.9
PHF1-208ENST00000486845 SLC39A7Q92504 469 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 BTN2A3PQ96KV6 586 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 GSDMAQ96QA5 445 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 SPAG5Q96R06 1193 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 GTPBP4Q9BZE4 634 aaKnown RBP20.69■□□□□ 0.9
PHF1-208ENST00000486845 ST7Q9NRC1 585 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 XPO7Q9UIA9 1087 aaKnown RBP20.69■□□□□ 0.9
PHF1-208ENST00000486845 DMTF1Q9Y222 760 aa20.69■□□□□ 0.9
PHF1-208ENST00000486845 SETXQ7Z333 2677 aaKnown RBP20.68■□□□□ 0.9
PHF1-208ENST00000486845 CAPN9O14815 690 aa20.68■□□□□ 0.9
PHF1-208ENST00000486845 DRD3P35462 400 aa20.68■□□□□ 0.9
PHF1-208ENST00000486845 RPL34P49207 117 aaKnown RBP20.68■□□□□ 0.9
PHF1-208ENST00000486845 CETN1Q12798 172 aa20.68■□□□□ 0.9
PHF1-208ENST00000486845 OVGP1Q12889 678 aa20.68■□□□□ 0.9
PHF1-208ENST00000486845 KANSL1Q7Z3B3 1105 aa20.68■□□□□ 0.9
PHF1-208ENST00000486845 SPATS2Q86XZ4 545 aaKnown RBP20.68■□□□□ 0.9
PHF1-208ENST00000486845 LSM14AQ8ND56 463 aaKnown RBP20.68■□□□□ 0.9
PHF1-208ENST00000486845 KAT5Q92993 513 aa20.68■□□□□ 0.9
PHF1-208ENST00000486845 FAM131CQ96AQ9 280 aa20.68■□□□□ 0.9
PHF1-208ENST00000486845 CYTH4Q9UIA0 394 aa20.68■□□□□ 0.9
PHF1-208ENST00000486845 ARID1BQ8NFD5 2236 aaPredicted RBP20.68■□□□□ 0.9
PHF1-208ENST00000486845 TRIM49BA6NDI0 452 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 F5H5T6 163 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 KALRNO60229 2985 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 SMC2O95347 1197 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 CALCAP01258 141 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 PRB1P04280 392 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 OXCT1P55809 520 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 ZC3H12AQ5D1E8 599 aaKnown RBP20.67■□□□□ 0.9
PHF1-208ENST00000486845 TTC39BQ5VTQ0 682 aaPredicted RBP20.67■□□□□ 0.9
PHF1-208ENST00000486845 FAM46CQ5VWP2 391 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 SYPL2Q5VXT5 272 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 ATP6V0D2Q8N8Y2 350 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 RFFLQ8WZ73 363 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 OR8D1Q8WZ84 308 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 FCRL3Q96P31 734 aaPredicted RBP20.67■□□□□ 0.9
PHF1-208ENST00000486845 ARHGAP20Q9P2F6 1191 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 SLC12A6Q9UHW9 1150 aa20.67■□□□□ 0.9
PHF1-208ENST00000486845 P4HA2O15460 535 aa20.66■□□□□ 0.9
PHF1-208ENST00000486845 PLRG1O43660 514 aaKnown RBP20.66■□□□□ 0.9
PHF1-208ENST00000486845 RTN2O75298 545 aa20.66■□□□□ 0.9
PHF1-208ENST00000486845 VAV1P15498 845 aa20.66■□□□□ 0.9
PHF1-208ENST00000486845 PDGFRAP16234 1089 aa20.66■□□□□ 0.9
PHF1-208ENST00000486845 GLDCP23378 1020 aa20.66■□□□□ 0.9
PHF1-208ENST00000486845 MAT2AP31153 395 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms