RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 TAF5Q15542 800 aa19.37■□□□□ 0.69
GMDS-205ENST00000486793 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.37■□□□□ 0.69
GMDS-205ENST00000486793 TMEM110Q86TL2 294 aa19.37■□□□□ 0.69
GMDS-205ENST00000486793 TRIM59Q8IWR1 403 aa19.37■□□□□ 0.69
GMDS-205ENST00000486793 SERAC1Q96JX3 654 aa19.37■□□□□ 0.69
GMDS-205ENST00000486793 BTN2A3PQ96KV6 586 aa19.37■□□□□ 0.69
GMDS-205ENST00000486793 TRIM62Q9BVG3 475 aa19.37■□□□□ 0.69
GMDS-205ENST00000486793 POPDC2Q9HBU9 364 aa19.37■□□□□ 0.69
GMDS-205ENST00000486793 GDF3Q9NR23 364 aa19.37■□□□□ 0.69
GMDS-205ENST00000486793 PCDHGA1Q9Y5H4 931 aa19.37■□□□□ 0.69
GMDS-205ENST00000486793 MUC22E2RYF6 1773 aaPredicted RBP19.37■□□□□ 0.69
GMDS-205ENST00000486793 TBC1D3DA0A087WVF3 549 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 TBC1D3IA0A087WXS9 549 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 TBC1D3EA0A087X179 549 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 TBC1D3KA0A087X1G2 549 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 TBC1D3FA6NER0 549 aaPredicted RBP19.36■□□□□ 0.69
GMDS-205ENST00000486793 KCNU1A8MYU2 1149 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 TBC1D3LB9A6J9 549 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 E5RJQ4 531 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 TLR4O00206 839 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 ENC1O14682 589 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 LETM1O95202 739 aaPredicted RBP19.36■□□□□ 0.69
GMDS-205ENST00000486793 IGLV3-25P01717 112 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 TBC1D3HP0C7X1 549 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 JUPP14923 745 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 VAV1P15498 845 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 MZF1P28698 734 aaPredicted RBP19.36■□□□□ 0.69
GMDS-205ENST00000486793 NNMTP40261 264 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 PPP1R2P41236 205 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 ADPRHP54922 357 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 CLDN6P56747 220 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 TBC1D3GQ6DHY5 549 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 TBC1D3CQ6IPX1 549 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 TBC1D3Q8IZP1 549 aaPredicted RBP19.36■□□□□ 0.69
GMDS-205ENST00000486793 EID2Q8N6I1 236 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 NELFBQ8WX92 580 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 ZNF606Q8WXB4 792 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 CNDP2Q96KP4 475 aaKnown RBP19.36■□□□□ 0.69
GMDS-205ENST00000486793 MED15Q96RN5 788 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 INTS2Q9H0H0 1204 aaKnown RBP19.36■□□□□ 0.69
GMDS-205ENST00000486793 UBE2TQ9NPD8 197 aaPredicted RBP19.36■□□□□ 0.69
GMDS-205ENST00000486793 ACP6Q9NPH0 428 aa19.36■□□□□ 0.69
GMDS-205ENST00000486793 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.36■□□□□ 0.69
GMDS-205ENST00000486793 URB1O60287 2271 aaKnown RBP19.35■□□□□ 0.69
GMDS-205ENST00000486793 A0A087WV48 116 aa19.35■□□□□ 0.69
GMDS-205ENST00000486793 F5H5T6 163 aa19.35■□□□□ 0.69
GMDS-205ENST00000486793 PLK4O00444 970 aa19.35■□□□□ 0.69
GMDS-205ENST00000486793 PDGFRAP16234 1089 aa19.35■□□□□ 0.69
GMDS-205ENST00000486793 NXPH1P58417 271 aa19.35■□□□□ 0.69
GMDS-205ENST00000486793 BNIP3Q12983 259 aa19.35■□□□□ 0.69
GMDS-205ENST00000486793 EIF4EBP2Q13542 120 aaPredicted RBP19.35■□□□□ 0.69
GMDS-205ENST00000486793 SLC12A1Q13621 1099 aa19.35■□□□□ 0.69
GMDS-205ENST00000486793 ELAVL3Q14576 367 aaKnown RBP19.35■□□□□ 0.69
GMDS-205ENST00000486793 CIR1Q86X95 450 aaPredicted RBP19.35■□□□□ 0.69
GMDS-205ENST00000486793 CCAR2Q8N163 923 aaKnown RBP19.35■□□□□ 0.69
GMDS-205ENST00000486793 ATP6V0D2Q8N8Y2 350 aa19.35■□□□□ 0.69
GMDS-205ENST00000486793 FRS2Q8WU20 508 aa19.35■□□□□ 0.69
GMDS-205ENST00000486793 BBC3Q96PG8 261 aaPredicted RBP19.35■□□□□ 0.69
GMDS-205ENST00000486793 PRMT1Q99873 361 aaKnown RBP19.35■□□□□ 0.69
GMDS-205ENST00000486793 THAP9Q9H5L6 903 aa19.35■□□□□ 0.69
GMDS-205ENST00000486793 SLC12A6Q9UHW9 1150 aa19.35■□□□□ 0.69
GMDS-205ENST00000486793 MED7O43513 233 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 LATO43561 262 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 AFPP02771 609 aaKnown RBP19.34■□□□□ 0.69
GMDS-205ENST00000486793 C1SP09871 688 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 EPHA8P29322 1005 aaPredicted RBP19.34■□□□□ 0.69
GMDS-205ENST00000486793 DRD3P35462 400 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 ARRB1P49407 418 aaPredicted RBP19.34■□□□□ 0.69
GMDS-205ENST00000486793 METAP1P53582 386 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 STX17P56962 302 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 PPP2CBP62714 309 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 PPP2CAP67775 309 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 SULT2A1Q06520 285 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 MEA1Q16626 185 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 FOXR2Q6PJQ5 311 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 ELOA2Q8IYF1 753 aaPredicted RBP19.34■□□□□ 0.69
GMDS-205ENST00000486793 CRELD1Q96HD1 420 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 SPAG5Q96R06 1193 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 ARHGAP20Q9P2F6 1191 aa19.34■□□□□ 0.69
GMDS-205ENST00000486793 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.34■□□□□ 0.69
GMDS-205ENST00000486793 BICDL2A1A5D9 508 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 E9PAM4 449 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 YKT6O15498 198 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 THAP12O43422 761 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 RTN2O75298 545 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 RFPL3O75679 317 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 GNA14O95837 355 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 PLK1P53350 603 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 SLC45A4Q5BKX6 768 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 PRPF39Q86UA1 669 aaKnown RBP19.33■□□□□ 0.68
GMDS-205ENST00000486793 SPATS2Q86XZ4 545 aaKnown RBP19.33■□□□□ 0.68
GMDS-205ENST00000486793 RNF34Q969K3 372 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 SRRTQ9BXP5 876 aaKnown RBP19.33■□□□□ 0.68
GMDS-205ENST00000486793 ERVMER34-1Q9H9K5 563 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 SARDHQ9UL12 918 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 TPX2Q9ULW0 747 aaKnown RBP19.33■□□□□ 0.68
GMDS-205ENST00000486793 CTNND2Q9UQB3 1225 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 GOLGA4Q13439 2230 aaKnown RBP19.33■□□□□ 0.68
GMDS-205ENST00000486793 ADAMTS20P59510 1910 aa19.33■□□□□ 0.68
GMDS-205ENST00000486793 SYNJ2BP-COX16A0A087WUM0 186 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms