RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 POLD3Q15054 466 aaPredicted RBP7.15□□□□□ -1.26
UBR4-214ENST00000486515 PDK1Q15118 436 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 ZNF77Q15935 545 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 ATP13A4Q4VNC1 1196 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 RNF219Q5W0B1 726 aaPredicted RBP7.15□□□□□ -1.26
UBR4-214ENST00000486515 IL31Q6EBC2 164 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 TIGD7Q6NT04 549 aaPredicted RBP7.15□□□□□ -1.26
UBR4-214ENST00000486515 FBXL22Q6P050 247 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 RFWD3Q6PCD5 774 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 MFSD7Q6UXD7 560 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 CHST9Q7L1S5 443 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 SETD3Q86TU7 594 aaPredicted RBP7.15□□□□□ -1.26
UBR4-214ENST00000486515 LRRC49Q8IUZ0 686 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 BBS7Q8IWZ6 715 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 PYROXD2Q8N2H3 581 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 CPXM2Q8N436 756 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 DCLK2Q8N568 766 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 ARFGAP1Q8N6T3 406 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 CCNYQ8ND76 341 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 CCDC26Q8TAB7 109 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 ACTRT1Q8TDG2 376 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 GRK7Q8WTQ7 553 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 SUSD6Q92537 303 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 RAPGEF5Q92565 580 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 BHMTQ93088 406 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 LRRC45Q96CN5 670 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 CCDC114Q96M63 670 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 CSPG4P5Q96PW8 444 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 RNF157Q96PX1 679 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 PEBP4Q96S96 227 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 MYADMQ96S97 322 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 KCTD15Q96SI1 283 aaPredicted RBP7.15□□□□□ -1.26
UBR4-214ENST00000486515 KXD1Q9BQD3 176 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 BBS2Q9BXC9 721 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 SPHK2Q9NRA0 654 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 CWC15Q9P013 229 aaKnown RBP7.15□□□□□ -1.26
UBR4-214ENST00000486515 EPS15L1Q9UBC2 864 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 CDC23Q9UJX2 597 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 CDV3Q9UKY7 258 aaKnown RBP7.15□□□□□ -1.26
UBR4-214ENST00000486515 CCL26Q9Y258 94 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 RAD54BQ9Y620 910 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 WNT6Q9Y6F9 365 aa7.15□□□□□ -1.26
UBR4-214ENST00000486515 MYH10P35580 1976 aa7.15□□□□□ -1.27
UBR4-214ENST00000486515 CEP295Q9C0D2 2601 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 hCG_1818297A0A087WSY0 165 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 GOLGA6L7A0A1B0GV03 622 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 CTAGE15A4D2H0 777 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 CCDC188H7C350 402 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 APOC4-APOC2K7ER74 178 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 DFFAO00273 331 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 TRDMT1O14717 391 aaKnown RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 SCAMP3O14828 347 aaKnown RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 MTSS1O43312 755 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 GAS8O95995 478 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 APOC2P02655 101 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 KLKB1P03952 638 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 CTAGE8P0CG41 777 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 ADH5P11766 374 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 KRT10P13645 584 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 TYRP14679 529 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 TCF4P15884 667 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 PTPN7P35236 360 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 GGCXP38435 758 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 NDST2P52849 883 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 GEMIN4P57678 1058 aaKnown RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 YBEYP58557 167 aaPredicted RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 PTPN13Q12923 2485 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 MMRN1Q13201 1228 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 SLC12A1Q13621 1099 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 RUNX3Q13761 415 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 GRM2Q14416 872 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 LLGL1Q15334 1064 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 CA9Q16790 459 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 ITPRIPL2Q3MIP1 535 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 PARP15Q460N3 678 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 RAB6CQ53S08 254 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 PIK3R6Q5UE93 754 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 OTUD1Q5VV17 481 aaPredicted RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 TXNRD3NBQ6F5E7 133 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 TANGO2Q6ICL3 276 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 RETSATQ6NUM9 610 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 DARS2Q6PI48 645 aaKnown RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 C1orf228Q6PIY5 440 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 ZNF783Q6ZMS7 281 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 Q6ZNB5 142 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 TFAP2DQ7Z6R9 452 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 ADAT2Q7Z6V5 191 aaKnown RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 CTAGE6Q86UF2 777 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 SLC13A5Q86YT5 568 aaPredicted RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 CDKL3Q8IVW4 592 aaPredicted RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 CTAGE4Q8IX94 777 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 CCDC105Q8IYK2 499 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 ZDHHC14Q8IZN3 488 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 CFAP52Q8N1V2 620 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 ATPAF2Q8N5M1 289 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 PAF1Q8N7H5 531 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 RTL3Q8N8U3 475 aaKnown RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 CCDC89Q8N998 374 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 RSAD2Q8WXG1 361 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms