RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 HNRNPA1L2Q32P51 320 aaKnown RBP13.27□□□□□ -0.29
CHMP3-208ENST00000486404 ARL13BQ3SXY8 428 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 DAB2IPQ5VWQ8 1189 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 DNAJC24Q6P3W2 148 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 ARCQ7LC44 396 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 PHLDB2Q86SQ0 1253 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 FAM131BQ86XD5 332 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 SLC41A1Q8IVJ1 513 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 APCDD1Q8J025 514 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 KDM1BQ8NB78 822 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 IGSF8Q969P0 613 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 NT5C3BQ969T7 300 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 AGPAT1Q99943 283 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 NUP58Q9BVL2 599 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
CHMP3-208ENST00000486404 ITM2CQ9NQX7 267 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 WSB2Q9NYS7 404 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-208ENST00000486404 TMEM59LQ9UK28 342 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 PILRBQ9UKJ0 227 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 NUMA1Q14980 2115 aa13.27□□□□□ -0.29
CHMP3-208ENST00000486404 TTC34A8MYJ7 566 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 GOLGA6L19H0YKK7 550 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 TEX33O43247 280 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 IGLV3-19P01714 112 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 MZF1P28698 734 aaPredicted RBP13.26□□□□□ -0.29
CHMP3-208ENST00000486404 PSMD8P48556 350 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 STK19P49842 368 aaPredicted RBP13.26□□□□□ -0.29
CHMP3-208ENST00000486404 RPS14P62263 151 aaKnown RBP13.26□□□□□ -0.29
CHMP3-208ENST00000486404 ASIC2Q16515 512 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 PPM1JQ5JR12 505 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 PEAR1Q5VY43 1037 aaPredicted RBP13.26□□□□□ -0.29
CHMP3-208ENST00000486404 CXorf57Q6NSI4 855 aaKnown RBP13.26□□□□□ -0.29
CHMP3-208ENST00000486404 TRNP1Q6NT89 227 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 ITIH6Q6UXX5 1313 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 TFAP2DQ7Z6R9 452 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 C3orf20Q8ND61 904 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 RPL10LQ96L21 214 aaKnown RBP13.26□□□□□ -0.29
CHMP3-208ENST00000486404 MRGPRX3Q96LB0 322 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 GTPBP2Q9BX10 602 aaKnown RBP13.26□□□□□ -0.29
CHMP3-208ENST00000486404 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 MIR1-1HGQ9H1L0 117 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 RSPH9Q9H1X1 276 aaPredicted RBP13.26□□□□□ -0.29
CHMP3-208ENST00000486404 MTG2Q9H4K7 406 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 TMEM74BQ9NUR3 256 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 MYO6Q9UM54 1294 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 NCKAP1Q9Y2A7 1128 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 SNX10Q9Y5X0 201 aa13.26□□□□□ -0.29
CHMP3-208ENST00000486404 MED19A0JLT2 244 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-208ENST00000486404 LRRC53A6NM62 1247 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 C4orf47A7E2U8 309 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 E9PAM4 449 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 SRGAP2O75044 1071 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 KRT3P12035 628 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-208ENST00000486404 ENGP17813 658 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 GPD1P21695 349 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 KRT83P78385 493 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 IRX4P78413 519 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 C15orf59Q2T9L4 293 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-208ENST00000486404 UAP1L1Q3KQV9 507 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 ACCSLQ4AC99 568 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 C6orf118Q5T5N4 469 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 DCAF12L1Q5VU92 463 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 PPP1R2P3Q6NXS1 205 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 SLC23A3Q6PIS1 610 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 DSG4Q86SJ6 1040 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 C14orf80Q86SX3 495 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 PHF13Q86YI8 300 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-208ENST00000486404 ZCCHC9Q8N567 271 aaKnown RBP13.25□□□□□ -0.29
CHMP3-208ENST00000486404 SPDYE1Q8NFV5 336 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-208ENST00000486404 CADM4Q8NFZ8 388 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 FAM172AQ8WUF8 416 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 RXFP2Q8WXD0 754 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 MYO19Q96H55 970 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 ZNF419Q96HQ0 510 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-208ENST00000486404 PCDHB18PQ96TA0 734 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 FUCA2Q9BTY2 467 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 C2orf49Q9BVC5 232 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-208ENST00000486404 BTBD1Q9H0C5 482 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 PCED1AQ9H1Q7 454 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 PABPC3Q9H361 631 aaKnown RBP13.25□□□□□ -0.29
CHMP3-208ENST00000486404 CBX8Q9HC52 389 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 SCML1Q9UN30 329 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 SLC6A14Q9UN76 642 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 CACNA1EQ15878 2313 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 PLXNA2O75051 1894 aa13.25□□□□□ -0.29
CHMP3-208ENST00000486404 SPTBN2O15020 2390 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 LAMA1P25391 3075 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 A0A1B0GTH6 734 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 A0A1W2PQC6 194 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 TARSL2A2RTX5 802 aaKnown RBP13.24□□□□□ -0.29
CHMP3-208ENST00000486404 C2CD4BA6NLJ0 364 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 RNASEH2AO75792 299 aaKnown RBP13.24□□□□□ -0.29
CHMP3-208ENST00000486404 CNTN5O94779 1100 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 GJB6O95452 261 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 SEMA4FO95754 770 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 SYPP08247 313 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 SERPINF2P08697 491 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 PTPN9P43378 593 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 PLK1P53350 603 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms