RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 MYO1CO00159 1063 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 KCNK1O00180 336 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 MATN3O15232 486 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 ANXA9O76027 345 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 USP1O94782 785 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 POLBP06746 335 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 SRGAP2BP0DMP2 458 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 CPB1P15086 417 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 CD68P34810 354 aaPredicted RBP12.24□□□□□ -0.45
PKP4-213ENST00000486254 RPA3P35244 121 aaPredicted RBP12.24□□□□□ -0.45
PKP4-213ENST00000486254 ETV4P43268 484 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 TBX4P57082 545 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 ZBTB17Q13105 803 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 CRYMQ14894 314 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 LRRC14Q15048 493 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 ANO4Q32M45 955 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 CNKSR3Q6P9H4 555 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 KLHDC10Q6PID8 442 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 SLC39A5Q6ZMH5 540 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 PRPF39Q86UA1 669 aaKnown RBP12.24□□□□□ -0.45
PKP4-213ENST00000486254 C4orf33Q8N1A6 199 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 PPM1NQ8N819 430 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 ATP6V0D2Q8N8Y2 350 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 PDZD8Q8NEN9 1154 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 ZNF398Q8TD17 642 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 MGARPQ8TDB4 240 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
PKP4-213ENST00000486254 FBXO32Q969P5 355 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 OXNAD1Q96HP4 312 aaPredicted RBP12.24□□□□□ -0.45
PKP4-213ENST00000486254 FCRL5Q96RD9 977 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 UBE2OQ9C0C9 1292 aaKnown RBP12.24□□□□□ -0.45
PKP4-213ENST00000486254 IL22Q9GZX6 179 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 KIF9Q9HAQ2 790 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 TMEM248Q9NWD8 314 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 SEPT10Q9P0V9 454 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 GMIPQ9P107 970 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 TBX21Q9UL17 535 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 HBS1LQ9Y450 684 aaKnown RBP12.24□□□□□ -0.45
PKP4-213ENST00000486254 HS3ST4Q9Y661 456 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 DNAH12Q6ZR08 3092 aa12.24□□□□□ -0.45
PKP4-213ENST00000486254 ARHGAP42A6NI28 874 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 TBKBP1A7MCY6 615 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 KLF11O14901 512 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 ZBTB24O43167 697 aaPredicted RBP12.23□□□□□ -0.45
PKP4-213ENST00000486254 MSI1O43347 362 aaKnown RBP12.23□□□□□ -0.45
PKP4-213ENST00000486254 MAFKO60675 156 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 PQBP1O60828 265 aaKnown RBP12.23□□□□□ -0.45
PKP4-213ENST00000486254 FSBPO95073 299 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 VNN2O95498 520 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 GSTA1P08263 222 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 CCL5P13501 91 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 GRIA1P42261 906 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 TUFMP49411 452 aaKnown RBP12.23□□□□□ -0.45
PKP4-213ENST00000486254 MGAT5Q09328 741 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 FAAP100Q0VG06 881 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 DDR2Q16832 855 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 USP41Q3LFD5 358 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 RTP2Q5QGT7 225 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 HHATQ5VTY9 493 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 CCDC121Q6ZUS5 278 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 SPATA21Q7Z572 469 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 CTAGE3PQ8IX95 158 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 TP53INP2Q8IXH6 220 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 MPP5Q8N3R9 675 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 OTUD6BQ8N6M0 293 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 ATAD1Q8NBU5 361 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 RAB3IL1Q8TBN0 382 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 CCT6BQ92526 530 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 ISL2Q96A47 359 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 FGFR1OP2Q9NVK5 253 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 SFMBT1Q9UHJ3 866 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 VANGL2Q9ULK5 521 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 MAFFQ9ULX9 164 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 ARL2BPQ9Y2Y0 163 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 CHD5Q8TDI0 1954 aa12.23□□□□□ -0.45
PKP4-213ENST00000486254 PCNTO95613 3336 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 WDR27A2RRH5 827 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 CXorf49A8MYA2 514 aaPredicted RBP12.22□□□□□ -0.45
PKP4-213ENST00000486254 FOXO6A8MYZ6 492 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 TRIM49D1C9J1S8 452 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 LPXNO60711 386 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 EFCAB14O75071 495 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 SPAG7O75391 227 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 CSH1P0DML2 217 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 CSH2P0DML3 217 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 CCNB1P14635 433 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 NFKB1P19838 968 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 MGAT1P26572 445 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 FOXN2P32314 431 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 ALDH7A1P49419 539 aaKnown RBP12.22□□□□□ -0.45
PKP4-213ENST00000486254 PGFP49763 221 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
PKP4-213ENST00000486254 TUBP50607 506 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 USP46P62068 366 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 CDH17Q12864 832 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 IFT88Q13099 833 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 SLC1A5Q15758 541 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 TCTN1Q2MV58 587 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 C5orf22Q49AR2 442 aa12.22□□□□□ -0.45
PKP4-213ENST00000486254 SYCP2LQ5T4T6 812 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms