RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 SIM1P81133 766 aaPredicted RBP13.33□□□□□ -0.28
SSR4-211ENST00000486204 GEN1Q17RS7 908 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 C5orf22Q49AR2 442 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 FBXO43Q4G163 708 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 CCDC122Q5T0U0 273 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.286e-15■■■■■ 44.6
SSR4-211ENST00000486204 LGI2Q8N0V4 545 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 HJURPQ8NCD3 748 aaPredicted RBP13.33□□□□□ -0.28
SSR4-211ENST00000486204 FAM172AQ8WUF8 416 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 RNF34Q969K3 372 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 IGSF8Q969P0 613 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 TMA16Q96EY4 203 aaKnown RBP13.33□□□□□ -0.28
SSR4-211ENST00000486204 LMLNQ96KR4 655 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 DDX50Q9BQ39 737 aaKnown RBP13.33□□□□□ -0.28
SSR4-211ENST00000486204 CNPY3Q9BT09 278 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 PACSIN1Q9BY11 444 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 SLC2A11Q9BYW1 496 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 WDCPQ9H6R7 721 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 NHEJ1Q9H9Q4 299 aaPredicted RBP13.33□□□□□ -0.28
SSR4-211ENST00000486204 TMEM51Q9NW97 253 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 ZNHIT6Q9NWK9 470 aaKnown RBP13.33□□□□□ -0.28
SSR4-211ENST00000486204 SNX10Q9Y5X0 201 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 SCINQ9Y6U3 715 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 SHROOM3Q8TF72 1996 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 ITPR1Q14643 2758 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 FLNBO75369 2602 aaKnown RBP13.32□□□□□ -0.28
SSR4-211ENST00000486204 TNRC6BQ9UPQ9 1833 aaKnown RBP13.32□□□□□ -0.28
SSR4-211ENST00000486204 ANKRD62A6NC57 917 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 F5H5T6 163 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 TBL1XO60907 577 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 CYP1A2P05177 515 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 HLA-FP30511 346 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 SCAPQ12770 1279 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 MTA1Q13330 715 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 AUHQ13825 339 aaKnown RBP13.32□□□□□ -0.28
SSR4-211ENST00000486204 FBXL22Q6P050 247 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 DCUN1D2Q6PH85 259 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 KIAA0907Q7Z7F0 614 aaPredicted RBP13.32□□□□□ -0.28
SSR4-211ENST00000486204 C14orf80Q86SX3 495 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 CFAP52Q8N1V2 620 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 CHCHD4Q8N4Q1 142 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 ARFGAP1Q8N6T3 406 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 CCDC185Q8N715 623 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.32□□□□□ -0.28
SSR4-211ENST00000486204 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 FNIP1Q8TF40 1166 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 HNRNPLLQ8WVV9 542 aaKnown RBP13.32□□□□□ -0.28
SSR4-211ENST00000486204 SPTLC3Q9NUV7 552 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 MYO1AQ9UBC5 1043 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 EBF1Q9UH73 591 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 SLC12A6Q9UHW9 1150 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 VANGL2Q9ULK5 521 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 INVSQ9Y283 1065 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 STARD13Q9Y3M8 1113 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 PAXBP1Q9Y5B6 917 aa13.32□□□□□ -0.28
SSR4-211ENST00000486204 ANKRD36A6QL64 1941 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 IGLV3-10A0A075B6K4 115 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 AKR1B10O60218 316 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 LUC7L3O95232 432 aaKnown RBP13.31□□□□□ -0.28
SSR4-211ENST00000486204 APBB3O95704 486 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 ADRA1BP35368 520 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 TNFRSF4P43489 277 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 SEC13P55735 322 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 LMAN2Q12907 356 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 TSR1Q2NL82 804 aaKnown RBP13.31□□□□□ -0.28
SSR4-211ENST00000486204 C10orf76Q5T2E6 689 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 EMC10Q5UCC4 262 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 MANEALQ5VSG8 457 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 PMS2CLQ68D20 193 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 TMEM215Q68D42 235 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 CYP2U1Q7Z449 544 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 C11orf74Q86VG3 221 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 CIR1Q86X95 450 aaPredicted RBP13.31□□□□□ -0.28
SSR4-211ENST00000486204 RPLP0P6Q8NHW5 317 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 NTAN1Q96AB6 310 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 C1orf74Q96LT6 269 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 CCDC42Q96M95 316 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 PANX2Q96RD6 677 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 HAPLN3Q96S86 360 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 MAGEB5Q9BZ81 275 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 MRPL47Q9HD33 250 aaKnown RBP13.31□□□□□ -0.28
SSR4-211ENST00000486204 ZDHHC4Q9NPG8 344 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 STIM2Q9P246 746 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 NEU3Q9UQ49 428 aa13.31□□□□□ -0.28
SSR4-211ENST00000486204 A0A1B0GVM2 712 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 TBC1D3BA6NDS4 549 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 TCAF2A6NFQ2 919 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 LCA5LO95447 670 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 PSMA2P25787 234 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 CD70P32970 193 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 MRPS21P82921 87 aaKnown RBP13.3□□□□□ -0.28
SSR4-211ENST00000486204 NRG1Q02297 640 aaPredicted RBP13.3□□□□□ -0.28
SSR4-211ENST00000486204 PREPLQ4J6C6 727 aaPredicted RBP13.3□□□□□ -0.28
SSR4-211ENST00000486204 C2orf27AQ580R0 203 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 FSCBQ5H9T9 825 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 TTC39BQ5VTQ0 682 aaPredicted RBP13.3□□□□□ -0.28
SSR4-211ENST00000486204 EGFLAMQ63HQ2 1017 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 CXorf57Q6NSI4 855 aaKnown RBP13.3□□□□□ -0.28
SSR4-211ENST00000486204 CYP4V2Q6ZWL3 525 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms