RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CETN2P41208 172 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 CSKP41240 450 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 TNFRSF4P43489 277 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 HCAR3P49019 387 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 LMAN2Q12907 356 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 DMC1Q14565 340 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 EIF4HQ15056 248 aaKnown RBP11.7□□□□□ -0.54
NUP50-216ENST00000486184 ATP13A4Q4VNC1 1196 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 RNF219Q5W0B1 726 aaPredicted RBP11.7□□□□□ -0.54
NUP50-216ENST00000486184 RNF43Q68DV7 783 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 TMCO3Q6UWJ1 677 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 ZNF783Q6ZMS7 281 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 SYNPOQ8N3V7 929 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 RTL3Q8N8U3 475 aaKnown RBP11.7□□□□□ -0.54
NUP50-216ENST00000486184 LRRC57Q8N9N7 239 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 TRIM58Q8NG06 486 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 WFDC5Q8TCV5 224 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 RBM41Q96IZ5 413 aaKnown RBP11.7□□□□□ -0.54
NUP50-216ENST00000486184 ZNF670Q9BS34 389 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 MAK16Q9BXY0 300 aaKnown RBP11.7□□□□□ -0.54
NUP50-216ENST00000486184 OSBPL6Q9BZF3 934 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 EPHX3Q9H6B9 360 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 LMAN1LQ9HAT1 526 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 TRMT1Q9NXH9 659 aaKnown RBP11.7□□□□□ -0.54
NUP50-216ENST00000486184 CWC15Q9P013 229 aaKnown RBP11.7□□□□□ -0.54
NUP50-216ENST00000486184 VPS28Q9UK41 221 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 CLEC4EQ9ULY5 219 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 TBC1D30Q9Y2I9 924 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 NUP205Q92621 2012 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 ILVBLA1L0T0 632 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 TIMM44O43615 452 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 KIF5CO60282 957 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 RAMP2O60895 175 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 PDGFBP01127 241 aaPredicted RBP11.69□□□□□ -0.54
NUP50-216ENST00000486184 ERCC2P18074 760 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 KDELR1P24390 212 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 CTNNA1P35221 906 aaKnown RBP11.69□□□□□ -0.54
NUP50-216ENST00000486184 SERPINB6P35237 376 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 MAGEA9P43362 315 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 RWDD2BP57060 319 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 ST8SIA6P61647 398 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 GNA12Q03113 381 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 DPYSL3Q14195 570 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 GEN1Q17RS7 908 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 PLEKHG6Q3KR16 790 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 FSCBQ5H9T9 825 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 PITRM1Q5JRX3 1037 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 MBLAC2Q68D91 279 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 IL31Q6EBC2 164 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 SDE2Q6IQ49 451 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 CXorf57Q6NSI4 855 aaKnown RBP11.69□□□□□ -0.54
NUP50-216ENST00000486184 TRMT11Q7Z4G4 463 aaKnown RBP11.69□□□□□ -0.54
NUP50-216ENST00000486184 NT5DC3Q86UY8 548 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 KATNAL2Q8IYT4 538 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 PHTF2Q8N3S3 785 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.69□□□□□ -0.54
NUP50-216ENST00000486184 UBE2Q2Q8WVN8 375 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 P2RY11Q96G91 374 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 CSPG4P5Q96PW8 444 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 SPON2Q9BUD6 331 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 C2orf49Q9BVC5 232 aaPredicted RBP11.69□□□□□ -0.54
NUP50-216ENST00000486184 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 FBRSL1Q9HCM7 1045 aaKnown RBP11.69□□□□□ -0.54
NUP50-216ENST00000486184 ATP13A1Q9HD20 1204 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 SLC25A13Q9UJS0 675 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 PYCARDQ9ULZ3 195 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 HPCAL4Q9UM19 191 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 PLA2G4CQ9UP65 541 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 F5P12259 2224 aa11.69□□□□□ -0.54
NUP50-216ENST00000486184 TTC28Q96AY4 2481 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 A0A0A0MRY4 1105 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 WASH4PA8MWX3 477 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 ATG13O75143 517 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 RNF40O75150 1001 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 ZRANB2O95218 330 aaKnown RBP eCLIP11.68□□□□□ -0.54
NUP50-216ENST00000486184 ASLP04424 464 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 CD48P09326 243 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 CHRNB1P11230 501 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 AOC1P19801 751 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 AMPD1P23109 780 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 CTNNA2P26232 953 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 NNMTP40261 264 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 DNA2P51530 1060 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 CLCN5P51795 746 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 YBEYP58557 167 aaPredicted RBP11.68□□□□□ -0.54
NUP50-216ENST00000486184 SULT2A1Q06520 285 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 CCINQ13939 588 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 DPYSQ14117 519 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 POLD3Q15054 466 aaPredicted RBP11.68□□□□□ -0.54
NUP50-216ENST00000486184 FUT11Q495W5 492 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 C2orf27AQ580R0 203 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 ANKRD20A8PQ5CZ79 823 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 NLRP14Q86W24 1093 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 VSIG1Q86XK7 387 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 RFX6Q8HWS3 928 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 CCDC105Q8IYK2 499 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 RCOR2Q8IZ40 523 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 FBXL6Q8N531 539 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 LZTR1Q8N653 840 aa11.68□□□□□ -0.54
NUP50-216ENST00000486184 ZNF513Q8N8E2 541 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms