RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 FRMD1Q8N878 549 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 C12orf50Q8NA57 414 aaPredicted RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 NEK11Q8NG66 645 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 ADAM32Q8TC27 787 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 WFDC5Q8TCV5 224 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 CENPIQ92674 756 aaPredicted RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 PRCCQ92733 491 aaPredicted RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 MYEOVQ96EZ4 313 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 ALG14Q96F25 216 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 VCPIP1Q96JH7 1222 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 MRGPRX3Q96LB0 322 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 PRICKLE1Q96MT3 831 aaPredicted RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 FUCA2Q9BTY2 467 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 EDEM3Q9BZQ6 932 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 SYNCQ9H7C4 482 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 OSGEPQ9NPF4 335 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 PRSS16Q9NQE7 514 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 TMEM74BQ9NUR3 256 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 DDIT4Q9NX09 232 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 XPO7Q9UIA9 1087 aaKnown RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 TPX2Q9ULW0 747 aaKnown RBP7.23□□□□□ -1.25
VPS50-218ENST00000485994 INVSQ9Y283 1065 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 OR51B4Q9Y5P0 310 aa7.23□□□□□ -1.25
VPS50-218ENST00000485994 A0A1W2PQC6 194 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 SIGLEC16A6NMB1 481 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 M0QYT0 321 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 EPHB6O15197 1021 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 GRAP2O75791 330 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 GFPT2O94808 682 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 ACADMP11310 421 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 PRKCHP24723 683 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 NNMTP40261 264 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 PTGER3P43115 390 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 PTPN9P43378 593 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 KLK7P49862 253 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 ST8SIA6P61647 398 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 IRX4P78413 519 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 ECT2LQ008S8 904 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 NRG1Q02297 640 aaPredicted RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 RPL6Q02878 288 aaKnown RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 CENPCQ03188 943 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 DEUP1Q05D60 604 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 CDH18Q13634 790 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 AUHQ13825 339 aaKnown RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 IQCB1Q15051 598 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 AASDHQ4L235 1098 aaPredicted RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 FNDC3BQ53EP0 1204 aaKnown RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 PITRM1Q5JRX3 1037 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 WDR45BQ5MNZ6 344 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 SYCP2LQ5T4T6 812 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 C9orf64Q5T6V5 341 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 OTUD1Q5VV17 481 aaPredicted RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 RAP1GAP2Q684P5 730 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 SND1Q7KZF4 910 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS50-218ENST00000485994 STRADAQ7RTN6 431 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 IRF2BP2Q7Z5L9 587 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 SETD3Q86TU7 594 aaPredicted RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 CHSY1Q86X52 802 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 PHF13Q86YI8 300 aaPredicted RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 SLC41A1Q8IVJ1 513 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 DHX40Q8IX18 779 aaKnown RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 ZNF683Q8IZ20 524 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 CCAR2Q8N163 923 aaKnown RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 CARNMT1Q8N4J0 409 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 C1orf216Q8TAB5 229 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 CPA5Q8WXQ8 436 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 SORCS1Q8WY21 1168 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 PIGKQ92643 395 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 PTPRN2Q92932 1015 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 RNF34Q969K3 372 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 FAM129BQ96TA1 746 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 FEM1AQ9BSK4 669 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 NUSAP1Q9BXS6 441 aaKnown RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 OSBPL2Q9H1P3 480 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 RSPH9Q9H1X1 276 aaPredicted RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 SGK2Q9HBY8 427 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 CAPN10Q9HC96 672 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 RXFP3Q9NSD7 469 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 FAM207AQ9NSI2 230 aaPredicted RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 PIGVQ9NUD9 493 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 AIPL1Q9NZN9 384 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 STIM2Q9P246 746 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 PPARGC1AQ9UBK2 798 aaKnown RBP7.22□□□□□ -1.25
VPS50-218ENST00000485994 SUSD2Q9UGT4 822 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 SLC6A14Q9UN76 642 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 ERVW-1Q9UQF0 538 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 RAD54BQ9Y620 910 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 HS3ST4Q9Y661 456 aa7.22□□□□□ -1.25
VPS50-218ENST00000485994 ACACBO00763 2458 aa7.21□□□□□ -1.25
VPS50-218ENST00000485994 MUC22E2RYF6 1773 aaPredicted RBP7.21□□□□□ -1.25
VPS50-218ENST00000485994 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.21□□□□□ -1.26
VPS50-218ENST00000485994 A0A1B0GTH6 734 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 EDDM13A0A1B0GTR0 161 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 TCRBV5S1A1TA0A578 114 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 LNP1A1A4G5 178 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 C2CD4BA6NLJ0 364 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 I6L893 689 aaPredicted RBP7.21□□□□□ -1.26
VPS50-218ENST00000485994 ALOX15BO15296 676 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 TEX33O43247 280 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 ATP9BO43861 1147 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms