RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 ZYG11BQ9C0D3 744 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 CATSPERBQ9H7T0 1116 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 KIF9Q9HAQ2 790 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 TRPV4Q9HBA0 871 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 CD320Q9NPF0 282 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 HOMER3Q9NSC5 361 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 MPP6Q9NZW5 540 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 DNPEPQ9ULA0 475 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 SH3BP1Q9Y3L3 701 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 NEU2Q9Y3R4 380 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 KIAA1549LQ6ZVL6 1849 aa11.64□□□□□ -0.55
SND1-212ENST00000485871 BRWD1Q9NSI6 2320 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 F5H5T6 163 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 SCAMP3O14828 347 aaKnown RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 RAD51CO43502 376 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 HEXIM1O94992 359 aaKnown RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 VCPP55072 806 aaKnown RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 RPS24P62847 133 aaKnown RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 GALNT2Q10471 571 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 XRCC4Q13426 336 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 DHX34Q14147 1143 aaKnown RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 FAM78AQ5JUQ0 283 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 ATAT1Q5SQI0 421 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 ALS2CLQ60I27 953 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 CCDC137Q6PK04 289 aaKnown RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 GET4Q7L5D6 327 aaPredicted RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 CIR1Q86X95 450 aaPredicted RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 GJD3Q8N144 294 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 P3H4Q92791 437 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 MYADMQ96S97 322 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 DDX50Q9BQ39 737 aaKnown RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 FAM129AQ9BZQ8 928 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 RAB17Q9H0T7 212 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 POMKQ9H5K3 350 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 RETREG1Q9H6L5 497 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 GDE1Q9NZC3 331 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 AMACRQ9UHK6 382 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 LSM7Q9UK45 103 aaKnown RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 CDH7Q9ULB5 785 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 DRG1Q9Y295 367 aaKnown RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 ZNF510Q9Y2H8 683 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 ZFP37Q9Y6Q3 630 aaPredicted RBP11.63□□□□□ -0.55
SND1-212ENST00000485871 COL4A2P08572 1712 aa11.63□□□□□ -0.55
SND1-212ENST00000485871 MIA3Q5JRA6 1907 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 FAM187AA6NFU0 413 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 TRDMT1O14717 391 aaKnown RBP11.62□□□□□ -0.55
SND1-212ENST00000485871 DAPK3O43293 454 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 MAP3K6O95382 1288 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 ITGAVP06756 1048 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 RBP3P10745 1247 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 OAS2P29728 719 aaKnown RBP11.62□□□□□ -0.55
SND1-212ENST00000485871 MTHFRP42898 656 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 EIF3EP60228 445 aaKnown RBP11.62□□□□□ -0.55
SND1-212ENST00000485871 SNX1Q13596 522 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 BYSLQ13895 437 aaKnown RBP11.62□□□□□ -0.55
SND1-212ENST00000485871 CES5AQ6NT32 575 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 RWDD4Q6NW29 188 aaKnown RBP11.62□□□□□ -0.55
SND1-212ENST00000485871 LRRC31Q6UY01 552 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 CHST9Q7L1S5 443 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 CFAP52Q8N1V2 620 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 UMODL1-AS1Q8N2C9 162 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 MREGQ8N565 214 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 LZTR1Q8N653 840 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 CELF5Q8N6W0 485 aaKnown RBP11.62□□□□□ -0.55
SND1-212ENST00000485871 NETO2Q8NC67 525 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 OR52K2Q8NGK3 314 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 HDAC11Q96DB2 347 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 RPRD1AQ96P16 312 aaPredicted RBP11.62□□□□□ -0.55
SND1-212ENST00000485871 QKIQ96PU8 341 aaKnown RBP eCLIP11.62□□□□□ -0.55
SND1-212ENST00000485871 SLC39A8Q9C0K1 460 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 USP29Q9HBJ7 922 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 FAM114A2Q9NRY5 505 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 OBP2AQ9NY56 170 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 DMGDHQ9UI17 866 aaKnown RBP11.62□□□□□ -0.55
SND1-212ENST00000485871 HEY1Q9Y5J3 304 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 RAD54BQ9Y620 910 aa11.62□□□□□ -0.55
SND1-212ENST00000485871 A0A1B0GVM2 712 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 BCLAF3A2AJT9 711 aaKnown RBP11.61□□□□□ -0.55
SND1-212ENST00000485871 TCAF2A6NFQ2 919 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 MCF2LO15068 1137 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 TTI1O43156 1089 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 OPA1O60313 960 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 VAV1P15498 845 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 SERPINB6P35237 376 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 CHKAP35790 457 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 VIPR2P41587 438 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 MAPKAPK2P49137 400 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 NDST2P52849 883 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 GDF10P55107 478 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 CDH4P55283 916 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 MRPS25P82663 173 aaKnown RBP11.61□□□□□ -0.55
SND1-212ENST00000485871 PPIDQ08752 370 aaKnown RBP11.61□□□□□ -0.55
SND1-212ENST00000485871 PRKD1Q15139 912 aaPredicted RBP11.61□□□□□ -0.55
SND1-212ENST00000485871 KCTD19Q17RG1 926 aaPredicted RBP11.61□□□□□ -0.55
SND1-212ENST00000485871 RABGAP1LQ5R372 815 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 TTC39BQ5VTQ0 682 aaPredicted RBP11.61□□□□□ -0.55
SND1-212ENST00000485871 ZC3H18Q86VM9 953 aaKnown RBP11.61□□□□□ -0.55
SND1-212ENST00000485871 JAMLQ86YT9 394 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 ALLCQ8N6M5 410 aa11.61□□□□□ -0.55
SND1-212ENST00000485871 GLIS1Q8NBF1 620 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms