RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PROSCO94903 275 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 ASLP04424 464 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 ATP5BP06576 529 aaKnown RBP12.17□□□□□ -0.46
HPS4-214ENST00000485842 DLDP09622 509 aaKnown RBP12.17□□□□□ -0.46
HPS4-214ENST00000485842 SP9P0CG40 484 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 HLA-EP13747 358 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 HNRNPLP14866 589 aaKnown RBP eCLIP12.17□□□□□ -0.46
HPS4-214ENST00000485842 RHOQP17081 205 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 IL12RB1P42701 662 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 CTSOP43234 321 aaPredicted RBP12.17□□□□□ -0.46
HPS4-214ENST00000485842 NOP2P46087 812 aaKnown RBP12.17□□□□□ -0.46
HPS4-214ENST00000485842 PXNP49023 591 aaPredicted RBP12.17□□□□□ -0.46
HPS4-214ENST00000485842 PTPN5P54829 565 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 SEMA3BQ13214 749 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 SLC12A1Q13621 1099 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 E2F5Q15329 346 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 CRY1Q16526 586 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 HADHQ16836 314 aaKnown RBP12.17□□□□□ -0.46
HPS4-214ENST00000485842 KCNT1Q5JUK3 1230 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 C6orf118Q5T5N4 469 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 TXNRD3NBQ6F5E7 133 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 SERPINA13PQ6UXR4 307 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 MAMSTRQ6ZN01 415 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 KIAA1328Q86T90 577 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 SETD3Q86TU7 594 aaPredicted RBP12.17□□□□□ -0.46
HPS4-214ENST00000485842 ZNF366Q8N895 744 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 KCNH6Q9H252 994 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.17□□□□□ -0.46
HPS4-214ENST00000485842 ZNF212Q9UDV6 495 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 DNAI1Q9UI46 699 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 LCMT1Q9UIC8 334 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 PLA2G4CQ9UP65 541 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 TBC1D30Q9Y2I9 924 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 REXO2Q9Y3B8 237 aaKnown RBP12.17□□□□□ -0.46
HPS4-214ENST00000485842 RAD54BQ9Y620 910 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 STON1Q9Y6Q2 735 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 TCRBV21S2A2A0A5A6 115 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 DAPK3O43293 454 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 MTA2O94776 668 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 PAPSS2O95340 614 aaPredicted RBP12.16□□□□□ -0.46
HPS4-214ENST00000485842 EPHX1P07099 455 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 RARAP10276 462 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 TDGF1P13385 188 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 GOT1P17174 413 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 PRKCHP24723 683 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 MAPKAPK2P49137 400 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 FNTBP49356 437 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 STK19P49842 368 aaPredicted RBP12.16□□□□□ -0.46
HPS4-214ENST00000485842 MRE11P49959 708 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 DGKEP52429 567 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 ST8SIA6P61647 398 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 SLC25A11Q02978 314 aaKnown RBP12.16□□□□□ -0.46
HPS4-214ENST00000485842 DMWDQ09019 674 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 PTPRNQ16849 979 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 ANO7Q6IWH7 933 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 NLRP14Q86W24 1093 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 OR7D4Q8NG98 312 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 HMGB4Q8WW32 186 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 TTC17Q96AE7 1141 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 RPL10LQ96L21 214 aaKnown RBP12.16□□□□□ -0.46
HPS4-214ENST00000485842 PPP1R9BQ96SB3 815 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 FEM1AQ9BSK4 669 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 SPON2Q9BUD6 331 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 CATSPERBQ9H7T0 1116 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 POLMQ9NP87 494 aaPredicted RBP12.16□□□□□ -0.46
HPS4-214ENST00000485842 NDFIP2Q9NV92 336 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 FAM86C1Q9NVL1 165 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 KLHL11Q9NVR0 708 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 TMEM248Q9NWD8 314 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 BCCIPQ9P287 314 aaKnown RBP eCLIP12.16□□□□□ -0.46
HPS4-214ENST00000485842 ERVW-1Q9UQF0 538 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 MUC6Q6W4X9 2439 aa12.16□□□□□ -0.46
HPS4-214ENST00000485842 A0A0D9SEW6 157 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 ILVBLA1L0T0 632 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 RCCD1A6NED2 376 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 NPC1O15118 1278 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 FGF10O15520 208 aaPredicted RBP12.15□□□□□ -0.46
HPS4-214ENST00000485842 SNAP91O60641 907 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 APBB3O95704 486 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 MAN1A1P33908 653 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 ARL4AP40617 200 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 ARHGAP25P42331 645 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 VAV2P52735 878 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 PLK1P53350 603 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 TAS2R40P59535 323 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 KRT83P78385 493 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 ECT2LQ008S8 904 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 GNA12Q03113 381 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 SULT2A1Q06520 285 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 KRT81Q14533 505 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 STARD3Q14849 445 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 BOLA3Q53S33 107 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 ZFYVE27Q5T4F4 411 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 KIAA1211LQ6NV74 962 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 RFX8Q6ZV50 586 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 ZNF354CQ86Y25 554 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 PSTKQ8IV42 348 aaKnown RBP12.15□□□□□ -0.46
HPS4-214ENST00000485842 PGBD3Q8N328 593 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms