RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 GBX2P52951 348 aaPredicted RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 YWHAZP63104 245 aaKnown RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 RPP38P78345 283 aaKnown RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 MGAT5Q09328 741 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 EPS8Q12929 822 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 TARDBPQ13148 414 aaKnown RBP eCLIP4.7□□□□□ -1.66
RTN4-213ENST00000485749 KIR3DS1Q14943 382 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 STK38Q15208 465 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 KYNUQ16719 465 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 ZNF827Q17R98 1081 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 SKIDA1Q1XH10 827 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 AAK1Q2M2I8 961 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 SLC5A9Q2M3M2 681 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 ERCC6LQ2NKX8 1250 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 VMACQ2NL98 169 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 SLC39A12Q504Y0 691 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 KLHDC7AQ5VTJ3 777 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 PDPK2PQ6A1A2 396 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 GADL1Q6ZQY3 521 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 TAOK1Q7L7X3 1001 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 STK32CQ86UX6 486 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 FAM90A1Q86YD7 464 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 GATAD2AQ86YP4 633 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 TUSC5Q8IXB3 177 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 LINS1Q8NG48 757 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 OR6B3Q8NGW1 331 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 CCDC26Q8TAB7 109 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 CREB3L4Q8TEY5 395 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 ZNF384Q8TF68 577 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 SNX33Q8WV41 574 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 VPS33AQ96AX1 596 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 FAM120BQ96EK7 910 aaKnown RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 C19orf60Q96EN9 201 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 IFT74Q96LB3 600 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 LENG8Q96PV6 779 aaPredicted RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 RAB3IPQ96QF0 476 aaPredicted RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 RUFY1Q96T51 708 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 GPR20Q99678 358 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 AGXT2Q9BYV1 514 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 TMPRSS5Q9H3S3 457 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 BCO1Q9HAY6 547 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 TNFRSF12AQ9NP84 129 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 SAYSD1Q9NPB0 183 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 SLC35C2Q9NQQ7 365 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 INTS13Q9NVM9 706 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 GDAP2Q9NXN4 497 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 BAG5Q9UL15 447 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 MYRFQ9Y2G1 1151 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 SIT1Q9Y3P8 196 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 USP15Q9Y4E8 981 aaPredicted RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 EFCAB5A4FU69 1503 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 HFM1A2PYH4 1435 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 CGNL1Q0VF96 1302 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 IRS2Q9Y4H2 1338 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 CCDC18Q5T9S5 1454 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 A0A0A6YYK5 440 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 IQANK1A0A1B0GTG1 560 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 LRRD1A4D1F6 860 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 CCDC151A5D8V7 595 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 K7ESM1 405 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 SH2B2O14492 632 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 IFIT3O14879 490 aaKnown RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 ZNF263O14978 683 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 ZSCAN9O15535 394 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 ARHGAP6O43182 974 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 GMFGO60234 142 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 TBX10O75333 385 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 POP4O95707 220 aaKnown RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 MT-ND5P03915 603 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 ITGA5P08648 1049 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 DBHP09172 617 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 TPBGLP0DKB5 382 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 GHRP10912 638 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 MYL4P12829 197 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 SDHBP21912 280 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 GALP22466 123 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 PRKACBP22694 351 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 PRDX5P30044 214 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 ACSL1P33121 698 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 PTGS2P35354 604 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 NUP62P37198 522 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 PPARGP37231 505 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 CPA2P48052 419 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 LMAN1P49257 510 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 RPS6KA3P51812 740 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 SESN2P58004 480 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 TGFB2P61812 414 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 CSNK2BP67870 215 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 NOP14P78316 857 aaKnown RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 PPIDQ08752 370 aaKnown RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 PLD1Q13393 1074 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 UBE3CQ15386 1083 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 TRADDQ15628 312 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 MST1LQ2TV78 715 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 CCDC14Q49A88 953 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 KCTD21Q4G0X4 260 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 AARDQ4LEZ3 155 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 SLC44A4Q53GD3 710 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 XKR3Q5GH77 459 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 SNX30Q5VWJ9 437 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms