RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 FZD4Q9ULV1 537 aa17.69■□□□□ 0.42
SMC4-216ENST00000485645 WDFY3Q8IZQ1 3526 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 A0A1W2PPC4 97 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 SRRM3A6NNA2 597 aaPredicted RBP17.68■□□□□ 0.42
SMC4-216ENST00000485645 KCNK3O14649 394 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 ADH1BP00325 375 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 C5AR1P21730 350 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 PSMD8P48556 350 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 STK19P49842 368 aaPredicted RBP17.68■□□□□ 0.42
SMC4-216ENST00000485645 C21orf59P57076 290 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 FBXL22Q6P050 247 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 LRSAM1Q6UWE0 723 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 FAM183BPQ6ZVS7 135 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 SND1Q7KZF4 910 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMC4-216ENST00000485645 STK40Q8N2I9 435 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 C1orf131Q8NDD1 294 aaKnown RBP17.68■□□□□ 0.42
SMC4-216ENST00000485645 OR2T34Q8NGX1 318 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 BAHD1Q8TBE0 780 aaPredicted RBP17.68■□□□□ 0.42
SMC4-216ENST00000485645 RPRD1AQ96P16 312 aaPredicted RBP17.68■□□□□ 0.42
SMC4-216ENST00000485645 PPP1R9BQ96SB3 815 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 ACE2Q9BYF1 805 aaPredicted RBP17.68■□□□□ 0.42
SMC4-216ENST00000485645 SYNCQ9H7C4 482 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 SIX2Q9NPC8 291 aa17.68■□□□□ 0.42
SMC4-216ENST00000485645 SPEGQ15772 3267 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 TMEM131Q92545 1883 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 DFNA5O60443 496 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 IL1BP01584 269 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 ERBB2P04626 1255 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 GOT1P17174 413 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 MZF1P28698 734 aaPredicted RBP17.67■□□□□ 0.42
SMC4-216ENST00000485645 CTSKP43235 329 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 NUMBP49757 651 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 CCT8P50990 548 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 PLK1P53350 603 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 SLC6A3Q01959 620 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 NME3Q13232 169 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 ELAVL3Q14576 367 aaKnown RBP17.67■□□□□ 0.42
SMC4-216ENST00000485645 MAN2A1Q16706 1144 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 OLFML1Q6UWY5 402 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 FAM114A1Q8IWE2 563 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 SKA1Q96BD8 255 aa17.67■□□□□ 0.42
SMC4-216ENST00000485645 AJAP1Q9UKB5 411 aaPredicted RBP17.67■□□□□ 0.42
SMC4-216ENST00000485645 ZZEF1O43149 2961 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 H0Y8X5 98 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 FOXN3O00409 490 aaPredicted RBP17.66■□□□□ 0.42
SMC4-216ENST00000485645 VILLO15195 856 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 DAB1O75553 588 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 NOS2P35228 1153 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 CLCN1P35523 988 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 GRK6P43250 576 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 CCR5P51681 352 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 BPIFB4P59827 614 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 C1QBPQ07021 282 aaKnown RBP17.66■□□□□ 0.42
SMC4-216ENST00000485645 AUHQ13825 339 aaKnown RBP17.66■□□□□ 0.42
SMC4-216ENST00000485645 PTPN20Q4JDL3 420 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 KCNT1Q5JUK3 1230 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 CXorf57Q6NSI4 855 aaKnown RBP17.66■□□□□ 0.42
SMC4-216ENST00000485645 SLC26A9Q7LBE3 791 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 SLC47A2Q86VL8 602 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 AADATQ8N5Z0 425 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 OR14C36Q8NHC7 312 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 SLC6A18Q96N87 628 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 SPAG5Q96R06 1193 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 NDST4Q9H3R1 872 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 EBF2Q9HAK2 575 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 VANGL2Q9ULK5 521 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 BTBD3Q9Y2F9 522 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 HS3ST4Q9Y661 456 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 FAM208BQ5VWN6 2430 aa17.66■□□□□ 0.42
SMC4-216ENST00000485645 PLXNA2O75051 1894 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.65■□□□□ 0.42
SMC4-216ENST00000485645 M0QYT0 321 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 PCDHGA12O60330 932 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 ATXN1LP0C7T5 689 aaKnown RBP17.65■□□□□ 0.42
SMC4-216ENST00000485645 PNMA6AP0CW24 399 aaPredicted RBP17.65■□□□□ 0.42
SMC4-216ENST00000485645 PRKCSHP14314 528 aaPredicted RBP17.65■□□□□ 0.42
SMC4-216ENST00000485645 VASPP50552 380 aaPredicted RBP17.65■□□□□ 0.42
SMC4-216ENST00000485645 CENPCQ03188 943 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 ZNF177Q13360 481 aaPredicted RBP17.65■□□□□ 0.42
SMC4-216ENST00000485645 ACCSLQ4AC99 568 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 VWA3BQ502W6 1294 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 CCNI2Q6ZMN8 369 aaPredicted RBP17.65■□□□□ 0.42
SMC4-216ENST00000485645 ZDHHC17Q8IUH5 632 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 ZNF397Q8NF99 534 aaPredicted RBP17.65■□□□□ 0.42
SMC4-216ENST00000485645 FRS2Q8WU20 508 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 PDCL3Q9H2J4 239 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 PLCB1Q9NQ66 1216 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 AASDHPPTQ9NRN7 309 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 TOR4AQ9NXH8 423 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 RRN3Q9NYV6 651 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 SLC25A13Q9UJS0 675 aa17.65■□□□□ 0.42
SMC4-216ENST00000485645 TPX2Q9ULW0 747 aaKnown RBP17.65■□□□□ 0.42
SMC4-216ENST00000485645 TBC1D3DA0A087WVF3 549 aa17.64■□□□□ 0.41
SMC4-216ENST00000485645 TBC1D3IA0A087WXS9 549 aa17.64■□□□□ 0.41
SMC4-216ENST00000485645 TBC1D3EA0A087X179 549 aa17.64■□□□□ 0.41
SMC4-216ENST00000485645 TBC1D3KA0A087X1G2 549 aa17.64■□□□□ 0.41
SMC4-216ENST00000485645 TBC1D3FA6NER0 549 aaPredicted RBP17.64■□□□□ 0.41
SMC4-216ENST00000485645 GOLGA8CPA6NN73 597 aa17.64■□□□□ 0.41
SMC4-216ENST00000485645 TBC1D3LB9A6J9 549 aa17.64■□□□□ 0.41
SMC4-216ENST00000485645 PAGE1O75459 146 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms