RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 HEMGNQ9BXL5 484 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 ACE2Q9BYF1 805 aaPredicted RBP16.26■□□□□ 0.19
APOE-205ENST00000485628 PLK2Q9NYY3 685 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 DTLQ9NZJ0 730 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 INTS6Q9UL03 887 aaKnown RBP16.26■□□□□ 0.19
APOE-205ENST00000485628 RAD54BQ9Y620 910 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 NYNRINQ9P2P1 1898 aaKnown RBP16.26■□□□□ 0.19
APOE-205ENST00000485628 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.25■□□□□ 0.19
APOE-205ENST00000485628 NEDD8-MDP1E9PL57 170 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 APOL1O14791 398 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 MFSD11O43934 449 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 FGGP02679 453 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 CHRM1P11229 460 aaPredicted RBP16.25■□□□□ 0.19
APOE-205ENST00000485628 SRFP11831 508 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 PECAM1P16284 738 aaPredicted RBP16.25■□□□□ 0.19
APOE-205ENST00000485628 HLA-FP30511 346 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 OR1E1P30953 314 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 CETN2P41208 172 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 NR2C2P49116 596 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 MESP2Q0VG99 397 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 ZNF177Q13360 481 aaPredicted RBP16.25■□□□□ 0.19
APOE-205ENST00000485628 LLGL1Q15334 1064 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 TMCO3Q6UWJ1 677 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 TFAP2DQ7Z6R9 452 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 RFX6Q8HWS3 928 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 CCDC50Q8IVM0 306 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 KIF18AQ8NI77 898 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 ARHGEF2Q92974 986 aaKnown RBP16.25■□□□□ 0.19
APOE-205ENST00000485628 FEM1AQ9BSK4 669 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 SLC39A8Q9C0K1 460 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 MAGEH1Q9H213 219 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 BRD9Q9H8M2 597 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 CDC23Q9UJX2 597 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 DUSP12Q9UNI6 340 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 MIA3Q5JRA6 1907 aa16.25■□□□□ 0.19
APOE-205ENST00000485628 A0A0D9SEW6 157 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 CXorf51AA0A1B0GTR3 108 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 DAPK3O43293 454 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 NARSO43776 548 aaKnown RBP16.24■□□□□ 0.19
APOE-205ENST00000485628 TULP3O75386 442 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 ZMPSTE24O75844 475 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 GLULP15104 373 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 GNA12Q03113 381 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 GALNT2Q10471 571 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 LMAN2Q12907 356 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 NR1H3Q13133 447 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 SLC12A1Q13621 1099 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 TUBB2AQ13885 445 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 NOMO1Q15155 1222 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 CYP1B1Q16678 543 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 ANO4Q32M45 955 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 ODF2Q5BJF6 829 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 C6orf118Q5T5N4 469 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 IER5LQ5T953 404 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 KAZNQ674X7 775 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 DRICH1Q6PGQ1 229 aaPredicted RBP16.24■□□□□ 0.19
APOE-205ENST00000485628 LRRC49Q8IUZ0 686 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 ZNF557Q8N988 423 aaPredicted RBP16.24■□□□□ 0.19
APOE-205ENST00000485628 SLC35B2Q8TB61 432 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 FATE1Q969F0 183 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 TSGA13Q96PP4 275 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 TUBB2BQ9BVA1 445 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 MAK16Q9BXY0 300 aaKnown RBP16.24■□□□□ 0.19
APOE-205ENST00000485628 CD320Q9NPF0 282 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 SAE1Q9UBE0 346 aaPredicted RBP16.24■□□□□ 0.19
APOE-205ENST00000485628 R3HDM2Q9Y2K5 976 aaKnown RBP16.24■□□□□ 0.19
APOE-205ENST00000485628 MRFAP1Q9Y605 127 aa16.24■□□□□ 0.19
APOE-205ENST00000485628 TYW5A2RUC4 315 aaKnown RBP16.23■□□□□ 0.19
APOE-205ENST00000485628 PGRMC1O00264 195 aaKnown RBP16.23■□□□□ 0.19
APOE-205ENST00000485628 TRIM24O15164 1050 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 PEX11BO96011 259 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 MZF1P28698 734 aaPredicted RBP16.23■□□□□ 0.19
APOE-205ENST00000485628 CD70P32970 193 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 SERPINB6P35237 376 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 SLC6A11P48066 632 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 OXCT1P55809 520 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 ZNF33AQ06730 810 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 XRCC4Q13426 336 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 SERINC3Q13530 473 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 PARP15Q460N3 678 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 TMEM215Q68D42 235 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 NPNTQ6UXI9 565 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 ADIPOR2Q86V24 386 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 MFN1Q8IWA4 741 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 PRELID2Q8N945 189 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 BHMTQ93088 406 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 TTC17Q96AE7 1141 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 XPO6Q96QU8 1125 aaKnown RBP16.23■□□□□ 0.19
APOE-205ENST00000485628 SMARCAL1Q9NZC9 954 aa16.23■□□□□ 0.19
APOE-205ENST00000485628 KIAA1522Q9P206 1035 aaPredicted RBP16.23■□□□□ 0.19
APOE-205ENST00000485628 RASA4BC9J798 803 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 H0Y626 953 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 NCAM2O15394 837 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 RASA4O43374 803 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 MAFKO60675 156 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 CD160O95971 181 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 CTHP32929 405 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 GARSP41250 739 aaKnown RBP16.22■□□□□ 0.19
APOE-205ENST00000485628 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
APOE-205ENST00000485628 PFKPQ01813 784 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms