RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 FGFR1OPO95684 399 aaKnown RBP19.85■□□□□ 0.77
COL27A1-205ENST00000485397 VAV1P15498 845 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 TRIM65Q6PJ69 517 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 C19orf48Q6RUI8 117 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 GATAD2AQ86YP4 633 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 CCAR2Q8N163 923 aaKnown RBP19.85■□□□□ 0.77
COL27A1-205ENST00000485397 OR14C36Q8NHC7 312 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 CPXM1Q96SM3 734 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 FAM204AQ9H8W3 233 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 AASDHPPTQ9NRN7 309 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 SLC12A6Q9UHW9 1150 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 FZD4Q9ULV1 537 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 PLXNA2O75051 1894 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 SPEGQ15772 3267 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 GRAP2O75791 330 aa19.84■□□□□ 0.77
COL27A1-205ENST00000485397 IL1BP01584 269 aa19.84■□□□□ 0.77
COL27A1-205ENST00000485397 GOT1P17174 413 aa19.84■□□□□ 0.77
COL27A1-205ENST00000485397 C5AR1P21730 350 aa19.84■□□□□ 0.77
COL27A1-205ENST00000485397 CDK17Q00537 523 aa19.84■□□□□ 0.77
COL27A1-205ENST00000485397 FBXL22Q6P050 247 aa19.84■□□□□ 0.77
COL27A1-205ENST00000485397 SND1Q7KZF4 910 aaKnown RBP eCLIP19.84■□□□□ 0.77
COL27A1-205ENST00000485397 PASD1Q8IV76 773 aa19.84■□□□□ 0.77
COL27A1-205ENST00000485397 RNF34Q969K3 372 aa19.84■□□□□ 0.77
COL27A1-205ENST00000485397 SLC2A13Q96QE2 648 aa19.84■□□□□ 0.77
COL27A1-205ENST00000485397 ELF4Q99607 663 aaPredicted RBP19.84■□□□□ 0.77
COL27A1-205ENST00000485397 DDIT4Q9NX09 232 aa19.84■□□□□ 0.77
COL27A1-205ENST00000485397 WDFY3Q8IZQ1 3526 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 A0A1W2PR77 199 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 FAM149AA5PLN7 773 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 PLK4O00444 970 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 DFNA5O60443 496 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 ADH1BP00325 375 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 ABCB4P21439 1286 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 NNMTP40261 264 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 IRAK1P51617 712 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 CCR5P51681 352 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 METAP1P53582 386 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 ADPRHP54922 357 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 SLC12A1Q13621 1099 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 SHBQ15464 509 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 CXorf57Q6NSI4 855 aaKnown RBP19.83■□□□□ 0.77
COL27A1-205ENST00000485397 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.83■□□□□ 0.77
COL27A1-205ENST00000485397 FRS2Q8WU20 508 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 PPP1R13BQ96KQ4 1090 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 RWDD2AQ9UIY3 292 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 GPSM3Q9Y4H4 160 aa19.83■□□□□ 0.77
COL27A1-205ENST00000485397 A0A1B0GVM2 712 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 TCAF2A6NFQ2 919 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 GLI1P08151 1106 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 SLC2A3P11169 496 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 CD38P28907 300 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 CCR1P32246 355 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 DRD3P35462 400 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 GGCXP38435 758 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 PLK1P53350 603 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 PPP2CBP62714 309 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 PPP2CAP67775 309 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 CENPCQ03188 943 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 SULT2A1Q06520 285 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 ELAVL3Q14576 367 aaKnown RBP19.82■□□□□ 0.76
COL27A1-205ENST00000485397 EFHC1Q5JVL4 640 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 RABGAP1LQ5R372 815 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 OR6B2Q6IFH4 312 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 DHRS13Q6UX07 377 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 GBP6Q6ZN66 633 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 FAM183BPQ6ZVS7 135 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 OR52K2Q8NGK3 314 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 SHC3Q92529 594 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 SKA1Q96BD8 255 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 ALG14Q96F25 216 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 SERAC1Q96JX3 654 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 FAM81BQ96LP2 452 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 ASNSD1Q9NWL6 643 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 APEX2Q9UBZ4 518 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 FTSJ1Q9UET6 329 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 AJAP1Q9UKB5 411 aaPredicted RBP19.82■□□□□ 0.76
COL27A1-205ENST00000485397 RAXQ9Y2V3 346 aa19.82■□□□□ 0.76
COL27A1-205ENST00000485397 TBC1D3DA0A087WVF3 549 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 TBC1D3IA0A087WXS9 549 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 TBC1D3EA0A087X179 549 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 TBC1D3KA0A087X1G2 549 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 TBC1D3FA6NER0 549 aaPredicted RBP19.81■□□□□ 0.76
COL27A1-205ENST00000485397 TRABD2BA6NFA1 517 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 TBC1D3LB9A6J9 549 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 CBX4O00257 560 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 HSF2BPO75031 334 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 TBC1D3HP0C7X1 549 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 AUHQ13825 339 aaKnown RBP19.81■□□□□ 0.76
COL27A1-205ENST00000485397 CAMK4Q16566 473 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 TTC39BQ5VTQ0 682 aaPredicted RBP19.81■□□□□ 0.76
COL27A1-205ENST00000485397 TBC1D3GQ6DHY5 549 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 TBC1D3CQ6IPX1 549 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 C14orf80Q86SX3 495 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 IRF2BP1Q8IU81 584 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 TBC1D3Q8IZP1 549 aaPredicted RBP19.81■□□□□ 0.76
COL27A1-205ENST00000485397 GALNT15Q8N3T1 639 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 C1orf131Q8NDD1 294 aaKnown RBP19.81■□□□□ 0.76
COL27A1-205ENST00000485397 RPRD1AQ96P16 312 aaPredicted RBP19.81■□□□□ 0.76
COL27A1-205ENST00000485397 SARDHQ9UL12 918 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 VANGL2Q9ULK5 521 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms