RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 DFFAO00273 331 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 KCNN4O15554 427 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 VPS41P49754 854 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 TERF1P54274 439 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 PPIDQ08752 370 aaKnown RBP14.92□□□□□ -0.02
LRIF1-202ENST00000485275 FSCBQ5H9T9 825 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 DUPD1Q68J44 220 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 MAATS1Q7Z4T9 603 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 CPXM2Q8N436 756 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 GPR161Q8N6U8 529 aaKnown RBP14.92□□□□□ -0.02
LRIF1-202ENST00000485275 HDAC11Q96DB2 347 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 RTP4Q96DX8 246 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 HMCESQ96FZ2 354 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 ERP44Q9BS26 406 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 CEP41Q9BYV8 373 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 NEUROG2Q9H2A3 272 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 DPH5Q9H2P9 285 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 LINC00597Q9H2U6 94 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 EPB41L5Q9HCM4 733 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 GDF3Q9NR23 364 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 PLK2Q9NYY3 685 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 ZMYM5Q9UJ78 669 aa14.92□□□□□ -0.02
LRIF1-202ENST00000485275 A0A0D9SEW6 157 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 A0A1B0GVM2 712 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 TCAF2A6NFQ2 919 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 FAM187AA6NFU0 413 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 TBL1XO60907 577 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 IFNB1P01574 187 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 KRT14P02533 472 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 HOXD9P28356 352 aaPredicted RBP14.91□□□□□ -0.02
LRIF1-202ENST00000485275 WEE1P30291 646 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 ACVRL1P37023 503 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 RPL21P46778 160 aaKnown RBP14.91□□□□□ -0.02
LRIF1-202ENST00000485275 CDH4P55283 916 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 RABGAP1LQ5R372 815 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 RNF43Q68DV7 783 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 TPGS1Q6ZTW0 290 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 CDKL3Q8IVW4 592 aaPredicted RBP14.91□□□□□ -0.02
LRIF1-202ENST00000485275 TDRD5Q8NAT2 981 aaKnown RBP14.91□□□□□ -0.02
LRIF1-202ENST00000485275 GRK7Q8WTQ7 553 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 TFB1MQ8WVM0 346 aaKnown RBP14.91□□□□□ -0.02
LRIF1-202ENST00000485275 SMARCD2Q92925 531 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 RUNDC3BQ96NL0 473 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 GUCD1Q96NT3 240 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 GRHL1Q9NZI5 618 aa14.91□□□□□ -0.02
LRIF1-202ENST00000485275 RASA4BC9J798 803 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 H3BQ06 376 aaPredicted RBP14.9□□□□□ -0.02
LRIF1-202ENST00000485275 KCNK1O00180 336 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 RASA4O43374 803 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 MAFKO60675 156 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 OR1E1P30953 314 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 MAPKAPK2P49137 400 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 CARSP49589 748 aaKnown RBP14.9□□□□□ -0.02
LRIF1-202ENST00000485275 PAPOLAP51003 745 aaKnown RBP14.9□□□□□ -0.02
LRIF1-202ENST00000485275 AP1B1Q10567 949 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 WASHC5Q12768 1159 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 ZBTB17Q13105 803 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 PDK1Q15118 436 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 PPP1R7Q15435 360 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 ATAT1Q5SQI0 421 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 FYB2Q5VWT5 728 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 CHST9Q7L1S5 443 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 GSTA5Q7RTV2 222 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 LZTR1Q8N653 840 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 CELF5Q8N6W0 485 aaKnown RBP14.9□□□□□ -0.02
LRIF1-202ENST00000485275 HJURPQ8NCD3 748 aaPredicted RBP14.9□□□□□ -0.02
LRIF1-202ENST00000485275 GAS2L1Q99501 681 aaPredicted RBP14.9□□□□□ -0.02
LRIF1-202ENST00000485275 CDX2Q99626 313 aaPredicted RBP14.9□□□□□ -0.02
LRIF1-202ENST00000485275 GDE1Q9NZC3 331 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 RAB21Q9UL25 225 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 CDH7Q9ULB5 785 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 ZNF510Q9Y2H8 683 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 SNX24Q9Y343 169 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 RAD54BQ9Y620 910 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 HACD1B0YJ81 288 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 PPP1R12AO14974 1030 aaPredicted RBP14.9□□□□□ -0.02
LRIF1-202ENST00000485275 GAS8O95995 478 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 PEX11BO96011 259 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 RPL22P35268 128 aaKnown RBP14.9□□□□□ -0.02
LRIF1-202ENST00000485275 NDST2P52849 883 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 TUBB4BP68371 445 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 TRIM68Q6AZZ1 485 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 TANGO2Q6ICL3 276 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 CES5AQ6NT32 575 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 TMEM25Q86YD3 366 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 CCNYQ8ND76 341 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 OR7D4Q8NG98 312 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 CCDC110Q8TBZ0 833 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 HTR3CQ8WXA8 447 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 SUSD6Q92537 303 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 ZFYVE19Q96K21 471 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 DDX50Q9BQ39 737 aaKnown RBP14.9□□□□□ -0.02
LRIF1-202ENST00000485275 PCDH9Q9HC56 1237 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 TBC1D30Q9Y2I9 924 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 COL6A3P12111 3177 aa14.9□□□□□ -0.02
LRIF1-202ENST00000485275 J3KR12 359 aa14.89□□□□□ -0.03
LRIF1-202ENST00000485275 RAMP2O60895 175 aa14.89□□□□□ -0.03
LRIF1-202ENST00000485275 CLDN11O75508 207 aa14.89□□□□□ -0.03
LRIF1-202ENST00000485275 LUC7L3O95232 432 aaKnown RBP14.89□□□□□ -0.03
LRIF1-202ENST00000485275 CLCN6P51797 869 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms