RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 STN1Q9H668 368 aaKnown RBP6.33□□□□□ -1.4
KPNA1-208ENST00000485027 KAT14Q9H8E8 782 aa6.33□□□□□ -1.4
KPNA1-208ENST00000485027 COQ10BQ9H8M1 238 aa6.33□□□□□ -1.4
KPNA1-208ENST00000485027 PLEKHA2Q9HB19 425 aa6.33□□□□□ -1.4
KPNA1-208ENST00000485027 CYP4F12Q9HCS2 524 aa6.33□□□□□ -1.4
KPNA1-208ENST00000485027 RPRD1BQ9NQG5 326 aaKnown RBP6.33□□□□□ -1.4
KPNA1-208ENST00000485027 PFDN4Q9NQP4 134 aa6.33□□□□□ -1.4
KPNA1-208ENST00000485027 FSCN3Q9NQT6 498 aa6.33□□□□□ -1.4
KPNA1-208ENST00000485027 USP40Q9NVE5 1235 aa6.33□□□□□ -1.4
KPNA1-208ENST00000485027 TLK1Q9UKI8 766 aa6.33□□□□□ -1.4
KPNA1-208ENST00000485027 TIMM13Q9Y5L4 95 aaPredicted RBP6.33□□□□□ -1.4
KPNA1-208ENST00000485027 NINLQ9Y2I6 1382 aa6.33□□□□□ -1.4
KPNA1-208ENST00000485027 COL5A2P05997 1499 aaPredicted RBP6.33□□□□□ -1.4
KPNA1-208ENST00000485027 MAP2P11137 1827 aaKnown RBP6.33□□□□□ -1.4
KPNA1-208ENST00000485027 SHISA3A0PJX4 238 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CAPN14A8MX76 684 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 LINC01387J3KSC0 135 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 TSPAN4O14817 238 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 SYN3O14994 580 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 FOXP2O15409 715 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CD3EAPO15446 510 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 RECQL5O94762 991 aaPredicted RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ALDH1A2O94788 518 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 SLCO2B1O94956 709 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 PDGFBP01127 241 aaPredicted RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 TFRCP02786 760 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 C4BPAP04003 597 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 RB1P06400 928 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CSF2RAP15509 400 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 RDXP35241 583 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CTAG1AP78358 180 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 SPIRE1Q08AE8 756 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 GPS1Q13098 491 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 PLD1Q13393 1074 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 NFIXQ14938 502 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 NFKBIBQ15653 356 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 C15orf59Q2T9L4 293 aaPredicted RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 EEF1DP3Q658K8 133 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 FIGNL1Q6PIW4 674 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 LIAT1Q6ZQX7 453 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CLEC17AQ6ZS10 378 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 KBTBD6Q86V97 674 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 SLC15A4Q8N697 577 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 MB21D1Q8N884 522 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 KDM1BQ8NB78 822 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 OR52M1Q8NGK5 317 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ZKSCAN4Q969J2 545 aaPredicted RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 DGAT2Q96PD7 388 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 MED15Q96RN5 788 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 FIZ1Q96SL8 496 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CDK5RAP1Q96SZ6 601 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 MAP7D2Q96T17 732 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 HERC2P3Q9BVR0 1158 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ZNF341Q9BYN7 854 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 WDCPQ9H6R7 721 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 TMEM206Q9H813 350 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 RRAGDQ9NQL2 400 aaPredicted RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ANAPC2Q9UJX6 822 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 DSEQ9UL01 958 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 PLAGL2Q9UPG8 496 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CHKBQ9Y259 395 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ATP11BQ9Y2G3 1177 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 SHANK3Q9BYB0 1731 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 FAM205AQ6ZU69 1335 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 MROH5Q6ZUA9 1318 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ANKRD36BQ8N2N9 1353 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 C7orf72A4D263 438 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ENO4A6NNW6 628 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CXCL11O14625 94 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ERLIN1O75477 346 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 RASSF9O75901 435 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 KCNK5O95279 499 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 PENKP01210 267 aaPredicted RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 EIF2S1P05198 315 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CYC1P08574 325 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 LTA4HP09960 611 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 KLRC1P26715 233 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 MC5RP33032 325 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 GNL1P36915 607 aaPredicted RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 KCNJ5P48544 419 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 LIG4P49917 911 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 MRPL12P52815 198 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 HADHBP55084 474 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ERVFC1P60507 584 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 RBM6P78332 1123 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CLCA4Q14CN2 919 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 PKN1Q16512 942 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 NAA35Q5VZE5 725 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 LETMD1Q6P1Q0 360 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ZDHHC24Q6UX98 284 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 KANSL1Q7Z3B3 1105 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CACNA2D4Q7Z3S7 1137 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ZGPATQ8N5A5 531 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 FAM133AQ8N9E0 248 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 ASB15Q8WXK1 588 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 RSC1A1Q92681 617 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 KLHDC7BQ96G42 594 aa6.32□□□□□ -1.4
KPNA1-208ENST00000485027 CNOT6LQ96LI5 555 aaKnown RBP6.32□□□□□ -1.4
KPNA1-208ENST00000485027 SPATA13Q96N96 652 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms