RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 PNPLA1Q8N8W4 532 aa20.78■□□□□ 0.92
ACTB-212ENST00000484841 OR2T34Q8NGX1 318 aa20.78■□□□□ 0.92
ACTB-212ENST00000484841 IGSF8Q969P0 613 aa20.78■□□□□ 0.92
ACTB-212ENST00000484841 TMEM121BQ9BXQ6 578 aaPredicted RBP20.78■□□□□ 0.92
ACTB-212ENST00000484841 NEUROG2Q9H2A3 272 aa20.78■□□□□ 0.92
ACTB-212ENST00000484841 STAP1Q9ULZ2 295 aa20.78■□□□□ 0.92
ACTB-212ENST00000484841 KMT2BQ9UMN6 2715 aaPredicted RBP20.77■□□□□ 0.92
ACTB-212ENST00000484841 A0A1W2PPC4 97 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 M0QYT0 321 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 GOT1P17174 413 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 NOS2P35228 1153 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 RAPGEF1Q13905 1077 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 ELAVL3Q14576 367 aaKnown RBP20.77■□□□□ 0.92
ACTB-212ENST00000484841 SLC45A4Q5BKX6 768 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 SLC47A2Q86VL8 602 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 CIR1Q86X95 450 aaPredicted RBP20.77■□□□□ 0.92
ACTB-212ENST00000484841 IRF2BP1Q8IU81 584 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 TMEM35BQ8NCS4 154 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 OR14C36Q8NHC7 312 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 NDST4Q9H3R1 872 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 AASDHPPTQ9NRN7 309 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 RRN3Q9NYV6 651 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 VANGL2Q9ULK5 521 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 TPX2Q9ULW0 747 aaKnown RBP20.77■□□□□ 0.92
ACTB-212ENST00000484841 TP53BP1Q12888 1972 aaPredicted RBP20.77■□□□□ 0.92
ACTB-212ENST00000484841 PLXNA2O75051 1894 aa20.77■□□□□ 0.92
ACTB-212ENST00000484841 GOLGA8CPA6NN73 597 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 FOXN3O00409 490 aaPredicted RBP20.76■□□□□ 0.91
ACTB-212ENST00000484841 CBFA2T3O75081 653 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 DAB1O75553 588 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 IGHV4-34P06331 123 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 ZNF18P17022 549 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 MZF1P28698 734 aaPredicted RBP20.76■□□□□ 0.91
ACTB-212ENST00000484841 NUMBP49757 651 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 STK19P49842 368 aaPredicted RBP20.76■□□□□ 0.91
ACTB-212ENST00000484841 PLK1P53350 603 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 EIF4EBP2Q13542 120 aaPredicted RBP20.76■□□□□ 0.91
ACTB-212ENST00000484841 AUHQ13825 339 aaKnown RBP20.76■□□□□ 0.91
ACTB-212ENST00000484841 FBXL22Q6P050 247 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 OLFML1Q6UWY5 402 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 OR8D1Q8WZ84 308 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 PTPRN2Q92932 1015 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 PRMT1Q99873 361 aaKnown RBP20.76■□□□□ 0.91
ACTB-212ENST00000484841 TUBGCP2Q9BSJ2 902 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 CLSTN2Q9H4D0 955 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 WDCPQ9H6R7 721 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 ADAMTS1Q9UHI8 967 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 PAXBP1Q9Y5B6 917 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 SLCO1B1Q9Y6L6 691 aa20.76■□□□□ 0.91
ACTB-212ENST00000484841 TBC1D3DA0A087WVF3 549 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 TBC1D3IA0A087WXS9 549 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 TBC1D3EA0A087X179 549 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 TBC1D3KA0A087X1G2 549 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 FAM221BA6H8Z2 402 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 TBC1D3FA6NER0 549 aaPredicted RBP20.75■□□□□ 0.91
ACTB-212ENST00000484841 TBC1D3LB9A6J9 549 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 KCNK3O14649 394 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 VILLO15195 856 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 ERBB2P04626 1255 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 TBC1D3HP0C7X1 549 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 GRK6P43250 576 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 RNASE9P60153 205 aaKnown RBP20.75■□□□□ 0.91
ACTB-212ENST00000484841 FAM46CQ5VWP2 391 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 TBC1D3GQ6DHY5 549 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 TBC1D3CQ6IPX1 549 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 LAYNQ6UX15 382 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 SLC26A9Q7LBE3 791 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 TBC1D3Q8IZP1 549 aaPredicted RBP20.75■□□□□ 0.91
ACTB-212ENST00000484841 MSANTD4Q8NCY6 345 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 SPAG5Q96R06 1193 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 FAM129BQ96TA1 746 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 SIK2Q9H0K1 926 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 SIX2Q9NPC8 291 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 PLCB1Q9NQ66 1216 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 TMEM51Q9NW97 253 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.75■□□□□ 0.911e-16■■□□□ 13.4
ACTB-212ENST00000484841 SERGEFQ9UGK8 458 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 VPS28Q9UK41 221 aa20.75■□□□□ 0.91
ACTB-212ENST00000484841 C1QTNF3-AMACRE9PGA6 284 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 H0Y8X5 98 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 CLDN11O75508 207 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 ERCC5P28715 1186 aaPredicted RBP20.74■□□□□ 0.91
ACTB-212ENST00000484841 CLCN1P35523 988 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 SULT1E1P49888 294 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 CENPCQ03188 943 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 HSP90AA4PQ58FG1 418 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.74■□□□□ 0.91
ACTB-212ENST00000484841 DBX2Q6ZNG2 339 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 PRPF39Q86UA1 669 aaKnown RBP20.74■□□□□ 0.91
ACTB-212ENST00000484841 ZNF397Q8NF99 534 aaPredicted RBP20.74■□□□□ 0.91
ACTB-212ENST00000484841 SLC6A18Q96N87 628 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 MUC3BQ9H195 1237 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 NUP62CLQ9H1M0 184 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 FARP1Q9Y4F1 1045 aaPredicted RBP20.74■□□□□ 0.91
ACTB-212ENST00000484841 HS3ST4Q9Y661 456 aa20.74■□□□□ 0.91
ACTB-212ENST00000484841 EPG5Q9HCE0 2579 aa20.73■□□□□ 0.91
ACTB-212ENST00000484841 CHD8Q9HCK8 2581 aa20.73■□□□□ 0.91
ACTB-212ENST00000484841 PCDHGA12O60330 932 aa20.73■□□□□ 0.91
ACTB-212ENST00000484841 PAGE1O75459 146 aa20.73■□□□□ 0.91
ACTB-212ENST00000484841 F9P00740 461 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms