RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 MZF1P28698 734 aaPredicted RBP13.33□□□□□ -0.28
UBR4-213ENST00000483922 MAT2AP31153 395 aaKnown RBP13.33□□□□□ -0.28
UBR4-213ENST00000483922 SLC11A2P49281 568 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 ARRB1P49407 418 aaPredicted RBP13.33□□□□□ -0.28
UBR4-213ENST00000483922 ECT2LQ008S8 904 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 LRMPQ12912 555 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 CDCP2Q5VXM1 449 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 TBC1D3GQ6DHY5 549 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 TBC1D3CQ6IPX1 549 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 NAPEPLDQ6IQ20 393 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 UNC45BQ8IWX7 931 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 SMYD4Q8IYR2 804 aaPredicted RBP13.33□□□□□ -0.28
UBR4-213ENST00000483922 TBC1D3Q8IZP1 549 aaPredicted RBP13.33□□□□□ -0.28
UBR4-213ENST00000483922 SIX6OS1Q8N1H7 587 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 DQX1Q8TE96 717 aaKnown RBP13.33□□□□□ -0.28
UBR4-213ENST00000483922 BAP1Q92560 729 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 KAT5Q92993 513 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 SKA1Q96BD8 255 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 NAF1Q96HR8 494 aaKnown RBP13.33□□□□□ -0.28
UBR4-213ENST00000483922 HECTD1Q9ULT8 2610 aa13.33□□□□□ -0.28
UBR4-213ENST00000483922 BSNQ9UPA5 3926 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 FAM237AA0A1B0GTK4 181 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 EDDM13A0A1B0GTR0 161 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 A0A1W2PNU3 283 aaPredicted RBP13.32□□□□□ -0.28
UBR4-213ENST00000483922 YKT6O15498 198 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 LUC7L3O95232 432 aaKnown RBP13.32□□□□□ -0.28
UBR4-213ENST00000483922 IL1BP01584 269 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 LTFP02788 710 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 KRT10P13645 584 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 NDUFA8P51970 172 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 SLC8A3P57103 927 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 TAS2R38P59533 333 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 EIF4EBP2Q13542 120 aaPredicted RBP13.32□□□□□ -0.28
UBR4-213ENST00000483922 SYPL2Q5VXT5 272 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 NUGGCQ68CJ6 796 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 KDM7AQ6ZMT4 941 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 HJURPQ8NCD3 748 aaPredicted RBP13.32□□□□□ -0.28
UBR4-213ENST00000483922 OR52K2Q8NGK3 314 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 IRGQQ8WZA9 623 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 ALG14Q96F25 216 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 HESX1Q9UBX0 185 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
UBR4-213ENST00000483922 LY6G6EA0A0G2JKS1 128 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 J3QKU1 62 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 PLRG1O43660 514 aaKnown RBP13.31□□□□□ -0.28
UBR4-213ENST00000483922 MPOP05164 745 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 MYL1P05976 194 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 SETSIPP0DME0 302 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 RPL13P26373 211 aaKnown RBP13.31□□□□□ -0.28
UBR4-213ENST00000483922 ACTN2P35609 894 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 RPL34P49207 117 aaKnown RBP13.31□□□□□ -0.28
UBR4-213ENST00000483922 PITX1P78337 314 aaPredicted RBP13.31□□□□□ -0.28
UBR4-213ENST00000483922 ZNF211Q13398 564 aaPredicted RBP13.31□□□□□ -0.28
UBR4-213ENST00000483922 CNGA2Q16280 664 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 AGBL4Q5VU57 503 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 RAP1GAP2Q684P5 730 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 PRMT1Q99873 361 aaKnown RBP13.31□□□□□ -0.28
UBR4-213ENST00000483922 DNAI2Q9GZS0 605 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 MIS12Q9H081 205 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 U3KQA8 63 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 PIEZO2Q9H5I5 2752 aa13.31□□□□□ -0.28
UBR4-213ENST00000483922 NYNRINQ9P2P1 1898 aaKnown RBP13.3□□□□□ -0.28
UBR4-213ENST00000483922 ERVH48-1M5A8F1 160 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 CAPN9O14815 690 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 CASC3O15234 703 aaKnown RBP13.3□□□□□ -0.28
UBR4-213ENST00000483922 MOCS2O96007 188 aaPredicted RBP13.3□□□□□ -0.28
UBR4-213ENST00000483922 ADH1BP00325 375 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 DGKAP23743 735 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 BRD2P25440 801 aaKnown RBP13.3□□□□□ -0.28
UBR4-213ENST00000483922 PMS1P54277 932 aaKnown RBP13.3□□□□□ -0.28
UBR4-213ENST00000483922 CNTN1Q12860 1018 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 LY6DQ14210 128 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 EDRF1Q3B7T1 1238 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 POM121L1PQ3SYA9 428 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 ZC3H12AQ5D1E8 599 aaKnown RBP13.3□□□□□ -0.28
UBR4-213ENST00000483922 ARHGAP40Q5TG30 622 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 CXorf57Q6NSI4 855 aaKnown RBP13.3□□□□□ -0.28
UBR4-213ENST00000483922 PRPF39Q86UA1 669 aaKnown RBP13.3□□□□□ -0.28
UBR4-213ENST00000483922 TAC4Q86UU9 113 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 IQCHQ86VS3 1027 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 CIR1Q86X95 450 aaPredicted RBP13.3□□□□□ -0.28
UBR4-213ENST00000483922 LGI2Q8N0V4 545 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 TMEM145Q8NBT3 493 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 TTC9Q92623 222 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 NOX5Q96PH1 765 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 GOLPH3LQ9H4A5 285 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 USP25Q9UHP3 1055 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 KIAA1257Q9ULG3 409 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 PPM1HQ9ULR3 514 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 TLR6Q9Y2C9 796 aa13.3□□□□□ -0.28
UBR4-213ENST00000483922 COL27A1Q8IZC6 1860 aaPredicted RBP13.29□□□□□ -0.28
UBR4-213ENST00000483922 BOD1L1Q8NFC6 3051 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 COL12A1Q99715 3063 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 NAV2Q8IVL1 2488 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 A0A1B0GVM2 712 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 OPA1O60313 960 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 IGLV3-25P01717 112 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 TACR2P21452 398 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 IRAK1P51617 712 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 PLK1P53350 603 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms