RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 GOLGA8CPA6NN73 597 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 I6L893 689 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-221ENST00000483778 RNASEH2AO75792 299 aaKnown RBP18.59■□□□□ 0.57
ATG4B-221ENST00000483778 SRPRAP08240 638 aaKnown RBP18.59■□□□□ 0.57
ATG4B-221ENST00000483778 CTSKP43235 329 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 PSMD8P48556 350 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 UBE2HP62256 183 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 CDK17Q00537 523 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 TTC31Q49AM3 519 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-221ENST00000483778 HSP90AA4PQ58FG1 418 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 OTUD1Q5VV17 481 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-221ENST00000483778 OR6B2Q6IFH4 312 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 IL27RAQ6UWB1 636 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 SLC47A2Q86VL8 602 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 ATP6V0D2Q8N8Y2 350 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 ZNF557Q8N988 423 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-221ENST00000483778 KDM1BQ8NB78 822 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 C1orf131Q8NDD1 294 aaKnown RBP18.59■□□□□ 0.57
ATG4B-221ENST00000483778 FRS2Q8WU20 508 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 SLC6A18Q96N87 628 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 FAM204AQ9H8W3 233 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 PCDHGC3Q9UN70 934 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 NCKAP1Q9Y2A7 1128 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 CEP83Q9Y592 693 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 SNX10Q9Y5X0 201 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 CACNA1GO43497 2377 aa18.59■□□□□ 0.57
ATG4B-221ENST00000483778 EDDM13A0A1B0GTR0 161 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 TMEM8BA6NDV4 472 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 F5H5T6 163 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 MTIF2P46199 727 aaKnown RBP18.58■□□□□ 0.56
ATG4B-221ENST00000483778 GRIA4P48058 902 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 NME3Q13232 169 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 AUHQ13825 339 aaKnown RBP18.58■□□□□ 0.56
ATG4B-221ENST00000483778 PTPN20Q4JDL3 420 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 OLFML1Q6UWY5 402 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 CCNI2Q6ZMN8 369 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-221ENST00000483778 ADAMTS1Q9UHI8 967 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 SARDHQ9UL12 918 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 PCDHGB2Q9Y5G2 931 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 OR51B4Q9Y5P0 310 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 ADAMTS20P59510 1910 aa18.58■□□□□ 0.56
ATG4B-221ENST00000483778 ACACAQ13085 2346 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 MYLKQ15746 1914 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 A0A1W2PPC4 97 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 RNASEH1O60930 286 aaKnown RBP18.57■□□□□ 0.56
ATG4B-221ENST00000483778 MOCS3O95396 460 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 RDXP35241 583 aaKnown RBP18.57■□□□□ 0.56
ATG4B-221ENST00000483778 DRD3P35462 400 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 PLK1P53350 603 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 SCAPQ12770 1279 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 KCNMA1Q12791 1236 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 TEAD4Q15561 434 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 EFHC1Q5JVL4 640 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 MIIPQ5JXC2 388 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 ARTNQ5T4W7 220 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 C11orf57Q6ZUT1 292 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-221ENST00000483778 CCDC117Q8IWD4 279 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-221ENST00000483778 RNF34Q969K3 372 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 OMDQ99983 421 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 TRIM62Q9BVG3 475 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 TMPRSS4Q9NRS4 437 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 VANGL2Q9ULK5 521 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 SCML1Q9UN30 329 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 APOBEC2Q9Y235 224 aaKnown RBP18.57■□□□□ 0.56
ATG4B-221ENST00000483778 HS3ST4Q9Y661 456 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 APC2O95996 2303 aa18.57■□□□□ 0.56
ATG4B-221ENST00000483778 GTPBP10A4D1E9 387 aaKnown RBP18.56■□□□□ 0.56
ATG4B-221ENST00000483778 PAGE1O75459 146 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 CNTN5O94779 1100 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 DKK1O94907 266 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 ADCY5O95622 1261 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 GLI1P08151 1106 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 GOT1P17174 413 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 CCR1P32246 355 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 SLC6A3Q01959 620 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 PTK2Q05397 1052 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 SHBQ15464 509 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.56■□□□□ 0.56
ATG4B-221ENST00000483778 MLKLQ8NB16 471 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 OR2T34Q8NGX1 318 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 FEM1AQ9BSK4 669 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 SIK2Q9H0K1 926 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 PIGVQ9NUD9 493 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 ASNSD1Q9NWL6 643 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 SLC12A6Q9UHW9 1150 aa18.56■□□□□ 0.56
ATG4B-221ENST00000483778 A0A1W2PR77 199 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 M0QYT0 321 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 RNF103O00237 685 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 VILLO15195 856 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 FLRT2O43155 660 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 HSF2BPO75031 334 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 IL1BP01584 269 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 ABCB4P21439 1286 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 ADPRHP54922 357 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 RNASE9P60153 205 aaKnown RBP18.55■□□□□ 0.56
ATG4B-221ENST00000483778 PPP2CBP62714 309 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 RACK1P63244 317 aaKnown RBP18.55■□□□□ 0.56
ATG4B-221ENST00000483778 PPP2CAP67775 309 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 DPCR1Q3MIW9 517 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 POM121L1PQ3SYA9 428 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms