RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, human

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD3-213	ENST00000483684	MPHOSPH6	Q99547	160 aa	Known RBP	4.64	□□□□□ -1.67
COMMD3-213	ENST00000483684	RTKN	Q9BST9	563 aa		4.64	□□□□□ -1.67
COMMD3-213	ENST00000483684	SORBS1	Q9BX66	1292 aa	Known RBP	4.64	□□□□□ -1.67
COMMD3-213	ENST00000483684	AAMDC	Q9H7C9	122 aa		4.64	□□□□□ -1.67
COMMD3-213	ENST00000483684	THSD1	Q9NS62	852 aa		4.64	□□□□□ -1.67
COMMD3-213	ENST00000483684	UTS2R	Q9UKP6	389 aa		4.64	□□□□□ -1.67
COMMD3-213	ENST00000483684	AGO2	Q9UKV8	859 aa	Known RBP	4.64	□□□□□ -1.67
COMMD3-213	ENST00000483684	SLC8A2	Q9UPR5	921 aa		4.64	□□□□□ -1.67
COMMD3-213	ENST00000483684	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	KIR2DS5	A0A0G2JLQ3	304 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684		F5H423	210 aa	Predicted RBP	4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	KIR2DS3	K7RE56	304 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	PRPF4	O43172	522 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	LARGE1	O95461	756 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	WNT1	P04628	370 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	ITGA2B	P08514	1039 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	CYP3A7	P24462	503 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	TBXAS1	P24557	533 aa	Predicted RBP	4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	POLD2	P49005	469 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	ICA1	Q05084	483 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	ODF3L2	Q3SX64	289 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	LIN54	Q6MZP7	749 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	TMEM88	Q6PEY1	159 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	LRIG3	Q6UXM1	1119 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	SPICE1	Q8N0Z3	855 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	EXD3	Q8N9H8	876 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	POF1B	Q8WVV4	589 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	EME1	Q96AY2	570 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	EID2B	Q96D98	161 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	HTATIP2	Q9BUP3	242 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	MYLK2	Q9H1R3	596 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	LRFN1	Q9P244	771 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	TAGLN3	Q9UI15	199 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	DAPP1	Q9UN19	280 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	PCDHA7	Q9UN72	937 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	LZTS1	Q9Y250	596 aa		4.63	□□□□□ -1.67
COMMD3-213	ENST00000483684	LMTK3	Q96Q04	1460 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	DPPA5	A6NC42	116 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	PRSS47	A8MTI9	375 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	RHOD	O00212	210 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	ACKR2	O00590	384 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	ACOT8	O14734	319 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	ATG13	O75143	517 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	ACTL6B	O94805	426 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	NFATC1	O95644	943 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	FGF3	P11487	239 aa	Predicted RBP	4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	CIITA	P33076	1130 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	SERPINF1	P36955	418 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	PNLIPRP1	P54315	467 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	P2RX3	P56373	397 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	DLGAP5	Q15398	846 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	SMTNL2	Q2TAL5	461 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	GFI1B	Q5VTD9	330 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	MDGA2	Q7Z553	956 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	RBM23	Q86U06	439 aa	Known RBP	4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	CUZD1	Q86UP6	607 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	MYLK4	Q86YV6	388 aa	Predicted RBP	4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	DDIAS	Q8IXT1	998 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	SAMD3	Q8N6K7	520 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	IQCF1	Q8N6M8	205 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	SCAMP5	Q8TAC9	235 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	ATP2A3	Q93084	1043 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	RMDN3	Q96TC7	470 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	TMEM120A	Q9BXJ8	343 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	BRD8	Q9H0E9	1235 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	SEPSECS	Q9HD40	501 aa	Known RBP	4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	LIN7C	Q9NUP9	197 aa	Known RBP	4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	DACT1	Q9NYF0	836 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	HERC5	Q9UII4	1024 aa	Known RBP	4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	LAMP3	Q9UQV4	416 aa		4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	COPG1	Q9Y678	874 aa	Known RBP	4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.62	□□□□□ -1.67
COMMD3-213	ENST00000483684	CXorf65	A6NEN9	183 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	AGAP5	A6NIR3	686 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	PIK3CD-AS1	Q5SR53	167 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	SULT6B1	Q6IMI4	303 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	NFRKB	Q6P4R8	1299 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	KLHL17	Q6TDP4	642 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	RAB11FIP2	Q7L804	512 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	SPATA2L	Q8IUW3	424 aa	Predicted RBP	4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	FBXL14	Q8N1E6	418 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	IP6K1	Q92551	441 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	KAT2A	Q92830	837 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	ADAD1	Q96M93	576 aa	Known RBP	4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	NTPCR	Q9BSD7	190 aa	Known RBP	4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	PABPC3	Q9H361	631 aa	Known RBP	4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	ELAC1	Q9H777	363 aa	Known RBP	4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	TXNRD2	Q9NNW7	524 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	PRDM8	Q9NQV8	689 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	FBXO4	Q9UKT5	387 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684	PCDHA10	Q9Y5I2	948 aa		4.61	□□□□□ -1.67
COMMD3-213	ENST00000483684		A6NNC1	897 aa		4.6	□□□□□ -1.67
COMMD3-213	ENST00000483684	EFCAB8	A8MWE9	144 aa		4.6	□□□□□ -1.67
COMMD3-213	ENST00000483684	HEXIM1	O94992	359 aa	Known RBP	4.6	□□□□□ -1.67
COMMD3-213	ENST00000483684	IGKV3-20	P01619	116 aa		4.6	□□□□□ -1.67
COMMD3-213	ENST00000483684	CSTB	P04080	98 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms