RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 DENND1BQ6P3S1 775 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 RSBN1LQ6PCB5 846 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-205ENST00000483122 MAMDC4Q6UXC1 1216 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 TMEM179Q6ZVK1 233 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 SAMD3Q8N6K7 520 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 ACMSDQ8TDX5 336 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 SLC7A3Q8WY07 619 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 SLCO4A1Q96BD0 722 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 TCHPQ9BT92 498 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 FRMD8Q9BZ67 464 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-205ENST00000483122 HAPLN2Q9GZV7 340 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 PRDM16Q9HAZ2 1276 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 MOCS1Q9NZB8 636 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 CYTH4Q9UIA0 394 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 GNPTGQ9UJJ9 305 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 TBXAS1P24557 533 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-205ENST00000483122 MAPK10P53779 464 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 GNA12Q03113 381 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 ITGADQ13349 1161 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 ART3Q13508 389 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 MOGQ16653 247 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 NHSL2Q5HYW2 709 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 C6orf183Q5T699 404 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 METTL21CQ5VZV1 264 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 EEPD1Q7L9B9 569 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 STARD8Q92502 1023 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 ZBTB45Q96K62 511 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-205ENST00000483122 CNDP1Q96KN2 507 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 AGAP3Q96P47 875 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 NOL11Q9H8H0 719 aaKnown RBP12.06□□□□□ -0.48
VTI1A-205ENST00000483122 AGO4Q9HCK5 861 aaKnown RBP12.06□□□□□ -0.48
VTI1A-205ENST00000483122 C20orf96Q9NUD7 363 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-205ENST00000483122 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-205ENST00000483122 GIT1Q9Y2X7 761 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 KRBA1A5PL33 1030 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 C9IYK1 514 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 SOCS2O14508 198 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 AQP9O43315 295 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 SEC24DO94855 1032 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-205ENST00000483122 METTL18O95568 372 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 GH2P01242 217 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 MPSTP25325 297 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 CNTFP26441 200 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 ETFBP38117 255 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 CCR10P46092 362 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 CRADDP78560 199 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 GALNT2Q10471 571 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 NME3Q13232 169 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 RAB39AQ14964 217 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 RGS21Q2M5E4 152 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 DEPDC1Q5TB30 811 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 SH3PXD2AQ5TCZ1 1133 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 TTC33Q6PID6 262 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-205ENST00000483122 KCNT2Q6UVM3 1135 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-205ENST00000483122 HERC6Q8IVU3 1022 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 C4orf19Q8IY42 314 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 PLD6Q8N2A8 252 aaKnown RBP12.06□□□□□ -0.48
VTI1A-205ENST00000483122 LRRC39Q96DD0 335 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 DOK1Q99704 481 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 RSAD1Q9HA92 442 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 SACM1LQ9NTJ5 587 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 TUBA8Q9NY65 449 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-205ENST00000483122 ADA2Q9NZK5 511 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 COL20A1Q9P218 1284 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 USP18Q9UMW8 372 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 ERGIC3Q9Y282 383 aa12.06□□□□□ -0.48
VTI1A-205ENST00000483122 TANC1Q9C0D5 1861 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 WDR27A2RRH5 827 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 FAM155AB1AL88 458 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 CFAP99D6REC4 459 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 F5H423 210 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 GOLGA8TH3BQL2 631 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 TRIM38O00635 465 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 NDUFB5O43674 189 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 CST3P01034 146 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 CHRNGP07510 517 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 F7P08709 466 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 DCKP27707 260 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 LIG4P49917 911 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 PSMC1P62191 440 aaKnown RBP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 ENPEPQ07075 957 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 NIPAL4Q0D2K0 466 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 SEZ6Q53EL9 994 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 CMC1Q7Z7K0 106 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 FAM110BQ8TC76 370 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 ADAMTS16Q8TE57 1224 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 TFAP2CQ92754 450 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 DCPSQ96C86 337 aaKnown RBP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 NTPCRQ9BSD7 190 aaKnown RBP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 IMPG2Q9BZV3 1241 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 CYP26B1Q9NR63 512 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 GID8Q9NWU2 228 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 GIN1Q9NXP7 522 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 ZNF182P17025 639 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-205ENST00000483122 PAX3P23760 479 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 RCVRNP35243 200 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 MAGEA6P43360 314 aa12.05□□□□□ -0.48
VTI1A-205ENST00000483122 TKFCQ3LXA3 575 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms