RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 NPC1O15118 1278 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 KCNQ3O43525 872 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 CBFA2T3O75081 653 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 SYF2O95926 243 aaKnown RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 VIPP01282 170 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 CRYABP02511 175 aaKnown RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 DHRS4L1P0CG22 281 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 TFEBP19484 476 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 TKTP29401 623 aaKnown RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 HOXA7P31268 230 aaPredicted RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 SLC8A1P32418 973 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 MAPK9P45984 424 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 B4GALNT1Q00973 533 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 FOXO1Q12778 655 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 ATP1A4Q13733 1029 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 CBFBQ13951 182 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 PTK2BQ14289 1009 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 RALBP1Q15311 655 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 SLC5A9Q2M3M2 681 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 EARS2Q5JPH6 523 aaKnown RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 FAM90A2PQ658T7 463 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 KRT27Q7Z3Y8 459 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 SAMD14Q8IZD0 417 aaPredicted RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 ADGRF4Q8IZF3 695 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 MMP21Q8N119 569 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 FAM71BQ8TC56 605 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 IPO4Q8TEX9 1081 aaKnown RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 RUBCNQ92622 972 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 KAT2BQ92831 832 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 EVI5LQ96CN4 794 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 C18orf8Q96DM3 657 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 P2RY11Q96G91 374 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 ZSCAN31Q96LW9 406 aaPredicted RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 NLRP4Q96MN2 994 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 PRPF18Q99633 342 aaKnown RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 TMEM120AQ9BXJ8 343 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 MAGEH1Q9H213 219 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 IPO11Q9UI26 975 aaKnown RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 FNDC1Q4ZHG4 1894 aaPredicted RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 ABCC3O15438 1527 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 FMN1Q68DA7 1419 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 SHPRHQ149N8 1683 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 TIAM1Q13009 1591 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 CDK12Q9NYV4 1490 aaPredicted RBP4.18□□□□□ -1.74
GTF3A-207ENST00000482655 CEP152O94986 1710 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 FAM135AQ9P2D6 1515 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 B4DGG1 531 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 ACKR2O00590 384 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 PRYO14603 147 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 PIP5K1BO14986 540 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 ITGA2BP08514 1039 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 EGR1P18146 543 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 GABRB3P28472 473 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 HOXD12P35452 270 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 SERPINF1P36955 418 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 ARL4CP56559 192 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 NSUN2Q08J23 767 aaKnown RBP eCLIP4.18□□□□□ -1.74
GTF3A-207ENST00000482655 TAF12Q16514 161 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 MAPKAPK3Q16644 382 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 ARHGAP15Q53QZ3 475 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 MANEAQ5SRI9 462 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 DAB2IPQ5VWQ8 1189 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 RAP1GAP2Q684P5 730 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 CCDC144NLQ6NUI1 221 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 LVRNQ6Q4G3 990 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 KIAA0408Q6ZU52 694 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 GALNT15Q8N3T1 639 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 GLIS1Q8NBF1 620 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 CELF1Q92879 486 aaKnown RBP4.18□□□□□ -1.74
GTF3A-207ENST00000482655 TBC1D20Q96BZ9 403 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 NUDT22Q9BRQ3 303 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 FAM234AQ9H0X4 552 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 TMEM8AQ9HCN3 771 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 PAPOLBQ9NRJ5 636 aaKnown RBP4.18□□□□□ -1.74
GTF3A-207ENST00000482655 RXFP3Q9NSD7 469 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 CA14Q9ULX7 337 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 PCDHGB3Q9Y5G1 929 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 CLIP1P30622 1438 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 CASKIN1Q8WXD9 1431 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 CAMSAP2Q08AD1 1489 aa4.18□□□□□ -1.74
GTF3A-207ENST00000482655 PIK3C2BO00750 1634 aa4.17□□□□□ -1.74
GTF3A-207ENST00000482655 AHDC1Q5TGY3 1603 aaPredicted RBP4.17□□□□□ -1.74
GTF3A-207ENST00000482655 CFAP65Q6ZU64 1925 aaKnown RBP4.17□□□□□ -1.74
GTF3A-207ENST00000482655 JCADQ9P266 1359 aa4.17□□□□□ -1.74
GTF3A-207ENST00000482655 PRDM15P57071 1507 aaPredicted RBP4.17□□□□□ -1.74
GTF3A-207ENST00000482655 KDM5AP29375 1690 aaKnown RBP4.17□□□□□ -1.74
GTF3A-207ENST00000482655 CCDC187A0A096LP49 1063 aa4.17□□□□□ -1.74
GTF3A-207ENST00000482655 IGLV5-39A0A0G2JS06 123 aa4.17□□□□□ -1.74
GTF3A-207ENST00000482655 AQP12BA6NM10 295 aa4.17□□□□□ -1.74
GTF3A-207ENST00000482655 C16orf96A6NNT2 1141 aa4.17□□□□□ -1.74
GTF3A-207ENST00000482655 GLP2RO95838 553 aa4.17□□□□□ -1.74
GTF3A-207ENST00000482655 SRGAP2BP0DMP2 458 aa4.17□□□□□ -1.74
GTF3A-207ENST00000482655 ALADP13716 330 aa4.17□□□□□ -1.74
GTF3A-207ENST00000482655 PECAM1P16284 738 aaPredicted RBP4.17□□□□□ -1.74
GTF3A-207ENST00000482655 CD53P19397 219 aa4.17□□□□□ -1.74
GTF3A-207ENST00000482655 IDUAP35475 653 aa4.17□□□□□ -1.74
GTF3A-207ENST00000482655 ALDH7A1P49419 539 aaKnown RBP4.17□□□□□ -1.74
GTF3A-207ENST00000482655 LINC00205P59089 165 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms