RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ARID5BQ14865 1188 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 TEAD4Q15561 434 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 CST6Q15828 149 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 ARL13BQ3SXY8 428 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 FILIP1LQ4L180 1135 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 C2CD6Q53TS8 623 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 N4BP2L1Q5TBK1 243 aaPredicted RBP20.48■□□□□ 0.87
MSH5-215ENST00000482280 MMAAQ8IVH4 418 aaKnown RBP20.48■□□□□ 0.87
MSH5-215ENST00000482280 SLC20A1Q8WUM9 679 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 IGSF8Q969P0 613 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 MRGPRX3Q96LB0 322 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 PABPC3Q9H361 631 aaKnown RBP20.48■□□□□ 0.87
MSH5-215ENST00000482280 MTG2Q9H4K7 406 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 ARHGEF38Q9NXL2 777 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 NOCTQ9UK39 431 aaKnown RBP20.48■□□□□ 0.87
MSH5-215ENST00000482280 SIK3Q9Y2K2 1263 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 ANKRD62A6NC57 917 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 FAM47DPA6NHR8 397 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 LRRC72A6NJI9 287 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 RNASEH2AO75792 299 aaKnown RBP20.47■□□□□ 0.87
MSH5-215ENST00000482280 FSBPO95073 299 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 ADCY5O95622 1261 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 ADH1BP00325 375 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 RHOCP08134 193 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 DESP17661 470 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 MZF1P28698 734 aaPredicted RBP20.47■□□□□ 0.87
MSH5-215ENST00000482280 SDC4P31431 198 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 GGCXP38435 758 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 PSMD8P48556 350 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 PLK1P53350 603 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 JAM2P57087 298 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 ELAVL3Q14576 367 aaKnown RBP20.47■□□□□ 0.87
MSH5-215ENST00000482280 IL27RAQ6UWB1 636 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 MYO19Q96H55 970 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 CCDC114Q96M63 670 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 CFAP57Q96MR6 1250 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 C2orf49Q9BVC5 232 aaPredicted RBP20.47■□□□□ 0.87
MSH5-215ENST00000482280 METTL5Q9NRN9 209 aaKnown RBP20.47■□□□□ 0.87
MSH5-215ENST00000482280 SLCO3A1Q9UIG8 710 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 FARP1Q9Y4F1 1045 aaPredicted RBP20.47■□□□□ 0.87
MSH5-215ENST00000482280 ITIH6Q6UXX5 1313 aa20.47■□□□□ 0.87
MSH5-215ENST00000482280 IL1BP01584 269 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 MMP8P22894 467 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 SLC8A1P32418 973 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 FLT3P36888 993 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 NUMBP49757 651 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 STK19P49842 368 aaPredicted RBP20.46■□□□□ 0.87
MSH5-215ENST00000482280 AFF3P51826 1226 aaKnown RBP20.46■□□□□ 0.87
MSH5-215ENST00000482280 ATP11AP98196 1134 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 ZNF252P-AS1Q0IIN9 211 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 ANO6Q4KMQ2 910 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 C6orf118Q5T5N4 469 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 C9orf64Q5T6V5 341 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 CXorf57Q6NSI4 855 aaKnown RBP20.46■□□□□ 0.87
MSH5-215ENST00000482280 ARCQ7LC44 396 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 ADAT2Q7Z6V5 191 aaKnown RBP20.46■□□□□ 0.87
MSH5-215ENST00000482280 DEFB124Q8NES8 71 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 OR8D1Q8WZ84 308 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 NT5C3BQ969T7 300 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 C1orf74Q96LT6 269 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 C11orf70Q9BRQ4 267 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 FEM1AQ9BSK4 669 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 C6orf106Q9H6K1 298 aaPredicted RBP20.46■□□□□ 0.87
MSH5-215ENST00000482280 ANGPTL2Q9UKU9 493 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 CKAP5Q14008 2032 aa20.46■□□□□ 0.87
MSH5-215ENST00000482280 EPHB6O15197 1021 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 MID1O15344 667 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 SRGAP2O75044 1071 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 CER1O95813 267 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 CYP1A1P04798 512 aaPredicted RBP20.45■□□□□ 0.86
MSH5-215ENST00000482280 CALB1P05937 261 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 TFE3P19532 575 aaPredicted RBP20.45■□□□□ 0.86
MSH5-215ENST00000482280 C5AR1P21730 350 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 FMO1Q01740 532 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 GRIK2Q13002 908 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 SLC14A1Q13336 389 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 FAM46CQ5VWP2 391 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 CAVIN1Q6NZI2 390 aaKnown RBP20.45■□□□□ 0.86
MSH5-215ENST00000482280 SETD3Q86TU7 594 aaPredicted RBP20.45■□□□□ 0.86
MSH5-215ENST00000482280 STK40Q8N2I9 435 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 SLC30A5Q8TAD4 765 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 SKA1Q96BD8 255 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 ERGIC2Q96RQ1 377 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 HAPLN3Q96S86 360 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 SELENOOQ9BVL4 669 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 ADAM22Q9P0K1 906 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 TMEM59LQ9UK28 342 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 FZD4Q9ULV1 537 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.45■□□□□ 0.86
MSH5-215ENST00000482280 PCDHB9Q9Y5E1 797 aa20.45■□□□□ 0.86
MSH5-215ENST00000482280 TNRC6BQ9UPQ9 1833 aaKnown RBP20.45■□□□□ 0.86
MSH5-215ENST00000482280 A0A1W2PP55 124 aa20.44■□□□□ 0.86
MSH5-215ENST00000482280 LRRC10BA6NIK2 292 aa20.44■□□□□ 0.86
MSH5-215ENST00000482280 C1QTNF3-AMACRE9PGA6 284 aa20.44■□□□□ 0.86
MSH5-215ENST00000482280 OR1E1P30953 314 aa20.44■□□□□ 0.86
MSH5-215ENST00000482280 TPM4P67936 248 aa20.44■□□□□ 0.86
MSH5-215ENST00000482280 HNRNPDQ14103 355 aaKnown RBP20.44■□□□□ 0.86
MSH5-215ENST00000482280 CDO1Q16878 200 aa20.44■□□□□ 0.86
MSH5-215ENST00000482280 OTUD1Q5VV17 481 aaPredicted RBP20.44■□□□□ 0.86
MSH5-215ENST00000482280 C14orf80Q86SX3 495 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms